Gene Fjoh_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0020 
Symbol 
ID5091002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp18745 
End bp20193 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content33% 
IMG OID644739403 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_001192377 
Protein GI146297786 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA AAACTTTATA CCAAAAAGAG GTATCATTAC AGGTCGACCG AAGAAGAGCT 
GGTGTCGAAT TAATCAAAGT GATAAGTGAT TTATGGTATG ACAAGTCCAT CGAAATGGTT
TTATTTAAAA ATCAATTATT GGATAAAAAT GTCAGCGACA TTATCAATCT TCATCAATAT
GCCGGTGAAT TTGTGGGCAA ACCTATTACA ATTTTCGATT CGGTCGAAAT CGCAAAAGTT
GTTTTATCAT TAGATCTTCC GCCTGCTAAA ATAGATCTGG GTAAATTAAC TTATGAATAC
CGACTTGAAG ATGAAAAATA TCCAGACGCA AGATATTTTG TTATCGAAAA ATTAAAAAAG
TCAAAATCTT CAAAAGAAAT TCAACCTAAA GATGTTGTTC TCTACGGTTT TGGAAGAATA
GGACGTTTAT TGGCAAGAGA ATTAATGTCT AAAACCGGAA AAGGAAATCA ATTGCGTTTG
AGAGCTATTG TTACCCGAGA TAAAAACGAC GCAACAAGTT TAGAAAAACG AGCTTCGTTA
TTGCGTTATG ATTCTATTCA TGGCGATTTT CAAGGTTCTG TAACTGCTGA TTCTAAAAAC
AATGCTTTAA TAATAAATGG AACAACAGTT CATGTTATTA CTTCAAATTC TCCAGAAGAA
ATCGATTATA CTGAATATGG AATCAATGAT GCATTAGTAA TCGATAATAC TGGAGCTTTT
ACAACCCAAG AAGCATTAAA AAGACATTTG AAATCTAATG GAGTAAATAA AGTTTTATTA
ACAGCACCAG GAAAAGGAGT TCCAAATATT GTTCATGGTG TAAATCATAA CGAATACGAT
CCAGATGAAA ATGATATTTT TTCTGCGGCT TCCTGCACAA CAAACGCTAT TACACCAGTT
TTAAAAGTTA TTGAGGAAAC TTTAGGAGTT GTAAAAGGGC ATTTAGAAAC GATTCACGCT
TATACAAACG ATCAAAATCT GGTCGATAAT ATGCATAGAA AATACCGTCG CGGAAGAGCT
GCTGCCTTAA ACATGGTTAT TACTGAAACA GGCGCTGGAA GTGCTGTCGC AAAAGCTTTA
CCGTCTTTAG AAGGAAAACT AACTTCTAAT GCTATCAGAG TTCCTGTACC TAATGGTTCT
TTAGTGGTTT TAAATTTAGA GGTTAAAAAA GCAACATCAA TTGCTGGGAT CAACAAAATC
ATGAAAAAAT ATGCTCTTGA AGGAGAACTT GTAGAGCAGA TAAAATATTC ATTGAATAAT
GAATTAGTTT CATCTGATAT TGTTGGAACT TCGGCTCCTT CTATTTATGA CAGCAATGCT
ACTATTGTTT CAAAAGATGG AAAAAATATT GTACTTTATA TTTGGTACGA CAATGAATAT
GGCTACAGTC ACCAAGTTAT TCGTTTAGCA AAATATATTG CTAAAGTAAG ACGTTATACT
TATTATTAA
 
Protein sequence
MSKKTLYQKE VSLQVDRRRA GVELIKVISD LWYDKSIEMV LFKNQLLDKN VSDIINLHQY 
AGEFVGKPIT IFDSVEIAKV VLSLDLPPAK IDLGKLTYEY RLEDEKYPDA RYFVIEKLKK
SKSSKEIQPK DVVLYGFGRI GRLLARELMS KTGKGNQLRL RAIVTRDKND ATSLEKRASL
LRYDSIHGDF QGSVTADSKN NALIINGTTV HVITSNSPEE IDYTEYGIND ALVIDNTGAF
TTQEALKRHL KSNGVNKVLL TAPGKGVPNI VHGVNHNEYD PDENDIFSAA SCTTNAITPV
LKVIEETLGV VKGHLETIHA YTNDQNLVDN MHRKYRRGRA AALNMVITET GAGSAVAKAL
PSLEGKLTSN AIRVPVPNGS LVVLNLEVKK ATSIAGINKI MKKYALEGEL VEQIKYSLNN
ELVSSDIVGT SAPSIYDSNA TIVSKDGKNI VLYIWYDNEY GYSHQVIRLA KYIAKVRRYT
YY