Gene Fjoh_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0006 
Symbol 
ID5091162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4610 
End bp5077 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content35% 
IMG OID644739389 
Productprotein tyrosine phosphatase 
Protein accessionYP_001192363 
Protein GI146297772 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.811776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTAA AAGTTTTAAT GGTTTGTTTG GGGAATATTT GCAGATCTCC TTTAGCAGAA 
GGAATTTTAG CATCAAAATT ACCCGCAGAC AAATTTATTG TAGATTCTGC AGGAACAGGA
TCATGGCATG TAGGACACTG CCCCGATAAG CGTTCCATAG ATGTTGCCCG CAAAAACGGA
ATCAACATAA GCGCACAAAA AGGCAGACAA ATTAAATCAT CCGATTTTGA TGAATTTGAT
TATATCTATG TAATGGATAA TTCAAATTTT CGTGATGTAG TTCATCTGGC TAAAACTCCT
GAACATAAAA GTAAAGTTCG TTTAATTCTT AACGAATTAT TCCCAGACGA AAATGTTGAT
GTTCCAGATC CTTATTATGG TTCCGCAAAT GGTTTTGACA ACGTTTACCA AATGCTAGAT
GAAGTAACAG ATTTAATTGC TGACCAGCTT CTAAAAAAAC ATTCTTAA
 
Protein sequence
MPVKVLMVCL GNICRSPLAE GILASKLPAD KFIVDSAGTG SWHVGHCPDK RSIDVARKNG 
INISAQKGRQ IKSSDFDEFD YIYVMDNSNF RDVVHLAKTP EHKSKVRLIL NELFPDENVD
VPDPYYGSAN GFDNVYQMLD EVTDLIADQL LKKHS