Gene Fjoh_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0003 
Symbol 
ID5091159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp1918 
End bp2550 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content33% 
IMG OID644739386 
Producthypothetical protein 
Protein accessionYP_001192360 
Protein GI146297769 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.606692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATATA ACGATACGTA TCAAACCATT GCCAGAAAAT CTGAAGAAGT ACTTTTTAAA 
GAAAAAGGAA GTAAATTCTT TGGTTATGCT TTTCCTATAG AAAACGAAGA AGAAGTAAAA 
CCTATTATAG AGGATTTACG AAAACTTCAT CCGCATGCTG TACATTATTG TTATGCTTAT 
CAATTAGGGA CAGCTCCCAA AATTTCTTAT CGTGCAAATG ATGATGGAGA GCCAAGCAAT 
ACAGCTGGAG CACCAATTTA CGGACAGATA CAATCTTTTG GCGTAACGAA CGTTCTTGTA 
GTTGTGGTTC GTATTTTTGG AGGCACAAAA TTAGGAGTCG GCGGATTAAT TGCGGCATAT 
CGAACAACCG CACAAATGAC ATTAGAAGTT TGTGAAATTG TTGAAAAAAC GATTGATGTT 
CATTTTTTAA TTTCTTTTGA TTATAAAAAC ATGAACAAAG TAATGCGTGT TATAAAAGAA 
AAAAAACTGG AAATAACATC TCAGGAAATG GAAATAGATG AAAATTCCGG TCTTCCAATT 
GGGAAAATCA TCACAAAAAC GCGAAAAAAA AATGCCGAAA TGATATTCGA CATTTTTGAT 
TTAATGTTTG AAATTGATGT TAAAATTATA TAA
 
Protein sequence
MEYNDTYQTI ARKSEEVLFK EKGSKFFGYA FPIENEEEVK PIIEDLRKLH PHAVHYCYAY 
QLGTAPKISY RANDDGEPSN TAGAPIYGQI QSFGVTNVLV VVVRIFGGTK LGVGGLIAAY 
RTTAQMTLEV CEIVEKTIDV HFLISFDYKN MNKVMRVIKE KKLEITSQEM EIDENSGLPI 
GKIITKTRKK NAEMIFDIFD LMFEIDVKII