| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2268 |
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| Symbol | |
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| ID | 5104220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2170427 |
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| End bp | 2171017 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640508165 |
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| Product | proteasome endopeptidase complex |
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| Protein accession | YP_001192330 |
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| Protein GI | 146305014 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGAAT TACCTTCAAC TGCAGTTGGT ATCAGGCTTC AAGATGGAGT GATTTTGGGA
GCAGTAAGGC GATTAAGTTA TGGCGGATAC GTGTTAAGTA AGTCTGCCAA GAAAGTTTTC
CCCATATCAA GGTTTGGAAT AGGAGGAGCG GGACTCTTCG GAGATCTTCA GGCACTAACG
AGGATAATGA ATGCAAACAT CAAATACTAT GAGCTTTACA ACAACAGGCC TATCTCTACT
AGAGCTGCTG CCAAGTTATT GTCAATAATA CTTTACCAGT ATAAGTATAT GCCCTTTATC
TCAGAGGTCT TATTCGGAGG AGTTGATAAC GGAGAACCAC AACTATATGT GTTAGATCCC
CTAGGTTCTC TCCTTGACGA TATATACGCA GCCGTGGGAT CTGGAGCTAG GGTAGCTATA
GGTGTCTTAG AGGCCGAATA TTCAGAGAAG CTAACGTTAA CCCAAGGAAG GGAACTTACC
ATAAAATCAT TGAGAGCTTC TGCTGAAAGA GACGTAACTT CAGGAGATGG AATAGATATT
CTTACCATTT CAAAGGATGG AAAAATAAAT ACTGAATTCC TATCATCTTA A
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| Protein sequence | MEELPSTAVG IRLQDGVILG AVRRLSYGGY VLSKSAKKVF PISRFGIGGA GLFGDLQALT
RIMNANIKYY ELYNNRPIST RAAAKLLSII LYQYKYMPFI SEVLFGGVDN GEPQLYVLDP
LGSLLDDIYA AVGSGARVAI GVLEAEYSEK LTLTQGRELT IKSLRASAER DVTSGDGIDI
LTISKDGKIN TEFLSS
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