| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2264 |
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| Symbol | |
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| ID | 5104216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2165944 |
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| End bp | 2167605 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640508161 |
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| Product | thermosome |
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| Protein accession | YP_001192326 |
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| Protein GI | 146305010 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.802406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCAC AAGCTACAGT TGCTACAACT CCAGAAGGTA TTCCTGTAAT TATTTTAAAG
GAAGGTTCAA GCAGAGCCTT TGGAAAGGAA GCCCTTAGGG CCAACATTGC TGCTGTCAAG
GCAGTAGAAG AGGCGTTGAG GACGACGTAT GGACCTAGAG GTATGGATAA GATGTTAGTA
GACAGTCTTG GAGACATCAC AATCACAAAC GACGGAGCTA CTTTGCTGGA CAAGATGGAT
CTACAGCATC CTGCCGCTAA ACTCTTAGTT CAGATAGCTA AGGGTCAAGA CGAAGAGACA
GCTGACGGAA CTAAGACTGC TGTGATTCTA TCAGGAGAAC TAGTCAGGAA AGCAGAGGAT
CTACTATACA AGGAGGTACA CCCAACCATT ATCATTAGTG GTTATAAGAA GGCTGAGGAA
GTAGCTCTTC AGACTATCCA AGAGATAGCG CAACCAATTA GCATTAATGA TGTTGAGTTG
ATGAAGAAGG TTGCTATGAC CTCATTGAGT AGCAAGGCAG TTGCTGGGTC AAGGGAGTAT
CTAAGCGATG TGGTAGTTAA GGCCGTATCC CAAGTAGCGG AACTTAGAGG GGATAAGTGG
TATGTGGATC TGGACAACAT TCAGATAGTC AAGAAGGCAG GAGGCAGTAT AAACGATACT
CAACTAATAT ATGGAATAAT AGTGGATAAA GAAGTAGTAC ACCCTGGAAT GCCTAAGAGG
GTAGAGAATG CTAAGATAGC TTTGATCGAC GCACCATTAG AGGTAGAAAA GCCAGAGCTA
GACGCTGAGA TTAGGATCAA CGATCCCACC CAGATGGAGA GATTCCTACA GGAAGAAGAG
AACATTATCA AGGAAAAAGT TGATATGATA GCCAAAACAG GGGCAAACGT AATAATTTGC
CAGAAGGGTA TTGATGAGGT AGCCCAGTCT TACTTGGCTA AGAAAGGAAT TCTAGCGGTA
AGGAGAGCAA AGAAGAGCGA TCTAGAGAAG TTAGCAAGAG CCACAGGAGG TAGGGTAGTA
TCCAATATTG AAGAAATATC AGAACAAGAT CTAGGACATG CAGCACTTGT AGAGGAGAGA
AAGATAGGAG AAGATAAGAT GGTCTTTGTG GAGGGAGCCA AGAATCCTAA GGCCATCAGT
ATACTTATCA GAGGAGGTCT AGAAAGAGTG GTAGACGAGA CTGAGAGGGC CTTGAGGGAT
GCCTTAGGAA CAGTCGCTGA CGTCATCAAG GATGGCAGAG CAGTAGCAGG CGGAGGAGCG
GTGGAAATCG AGATTGCAAA GAGGTTGAGG AAGAAGGCTC CACAAGTTGG AGGTAAGGAA
CAGCTAGCAA TAGAGGCTTA CGCTAATGCT CTGGAGAGCC TTGTGATGAT ATTGGTAGAG
AATGCTGGTT TCGATCCTAT AGATCAATTG ATGAAACTAA GGTCCCTCCA TGAGAATGAG
GCAAATAAGT GGTACGGCGT GGATCTCAAT ACAGGTCAAC CCACTGATAA CTGGGCAAGG
GGCGTAATAG AGCCAGCTCT AGTAAAGATG AATGCCATCA AGGCAGCCAC AGAGGCTACC
ACACTGATAC TCAGAATAGA TGATCTAGTA GCTGCGGGTA AGAAGTCTGG TGGAACTGGA
GGAAAGGATA ACAAGTCAGA GAAGCCTTCT GAAGAGGATT AA
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| Protein sequence | MASQATVATT PEGIPVIILK EGSSRAFGKE ALRANIAAVK AVEEALRTTY GPRGMDKMLV
DSLGDITITN DGATLLDKMD LQHPAAKLLV QIAKGQDEET ADGTKTAVIL SGELVRKAED
LLYKEVHPTI IISGYKKAEE VALQTIQEIA QPISINDVEL MKKVAMTSLS SKAVAGSREY
LSDVVVKAVS QVAELRGDKW YVDLDNIQIV KKAGGSINDT QLIYGIIVDK EVVHPGMPKR
VENAKIALID APLEVEKPEL DAEIRINDPT QMERFLQEEE NIIKEKVDMI AKTGANVIIC
QKGIDEVAQS YLAKKGILAV RRAKKSDLEK LARATGGRVV SNIEEISEQD LGHAALVEER
KIGEDKMVFV EGAKNPKAIS ILIRGGLERV VDETERALRD ALGTVADVIK DGRAVAGGGA
VEIEIAKRLR KKAPQVGGKE QLAIEAYANA LESLVMILVE NAGFDPIDQL MKLRSLHENE
ANKWYGVDLN TGQPTDNWAR GVIEPALVKM NAIKAATEAT TLILRIDDLV AAGKKSGGTG
GKDNKSEKPS EED
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