Gene Msed_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2218 
Symbol 
ID5104279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2127051 
End bp2127461 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content46% 
IMG OID640508111 
Producthypothetical protein 
Protein accessionYP_001192280 
Protein GI146304964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000342565 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGGGATG ATTTTGAACA AAGGAGGGAA CAGCCCAGGG ATAGGAGGAG TAGACCGACT 
GATGGTGAGC CTAGACCACT TCCCCTTGGG GATAAATGTA ACTACTTGTG CCCCTATTTC
AGGTGCAACA AGAGAGCCCT AATGATCCAG ACAAGATACG TGAAGGGTAA TCCACAGAAG
GTAGGTTTCT GTAGATGGGT TGGAGATACC TGCATTACCG GCGAATGCCA GTACGCATAT
TGTGAGAAAA GGGCTCTATT GCCTGGAAAT AAGTGCGCTT TTGCTATCAA CAGGAACAAT
GGGGGAGATG ATGTGGAGAG GGATCTTAAA CAGGACGAAC TATATGAGGA CGATAAGGTT
AAGGAGATAA TTTCCAAGAA ATTTGGCAAG AGGGATCTGG ATCTTATCTA G
 
Protein sequence
MRDDFEQRRE QPRDRRSRPT DGEPRPLPLG DKCNYLCPYF RCNKRALMIQ TRYVKGNPQK 
VGFCRWVGDT CITGECQYAY CEKRALLPGN KCAFAINRNN GGDDVERDLK QDELYEDDKV
KEIISKKFGK RDLDLI