| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2204 |
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| Symbol | |
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| ID | 5105424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2115023 |
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| End bp | 2116066 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640508097 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001192266 |
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| Protein GI | 146304950 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000400167 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGTTT TGAGAAGGAT TGCTATCCTT ATCCCGACAT TGATCGGACT TACCCTTCTT
GTGTTCGTAC TAATCCATCT TCAGGGTAAT AATTTAATTC TTTCTGAATA TCTAAATCCT
AGATTAACCG GTCAGGCAAG AGAACTCGCT ATTCAAAGAT TAACTCAAGA ATTTCACCTG
AATCAACCGG TGTATATACA GTACTTTTAT TGGTTAGCGC AAGTTTTTAG CGGGAACTTT
GGCTACACCA ACACTCCCAT ATTTAGCGGA CCAGTCTCGA CTGCAATTGT ACTTTTCCTC
CCAAACACGG TAATATTATC CCTCTTTGCT GCCCTGCTGA TCTGGCTGAT TGGGATTCCC
CTTGGCGTAT TCTCGGCAGT GAATAGGGAC TCGGCAGCTG ATCAGGGAAT AAGAGTTTTC
TCCTTCACTC TCTACTCTAT GCCAATTTAC TTGATCGCTA TTGCCCTAAT CCTTATCCTT
GGGGTGTATA CGGGTATATT ACCCTTCAGC GGAGAAGTCT CTCCTCAACT TGTTTCCGGT
CTACCCTGGT ACGTTAACGG AATATCTTAT CCCACCCATG TCCTTCTAAT TGACGCAATC
ATACACGGGG ATTTCGCAGT AGCATGGAAC GCATTCCTAC ATCTAATAAT GCCAGCCCTT
ACATTAGCCT TGGCGGTTAT GGCTGGGATT ATCAGAATAT TGAGAGCCAG CATGCTTGAA
ACTCTAGAGC AGGACTACAT TAAACTGGCC AGAGCTAAGG GTGTGCCTGA AAAGGTCGTT
AACAATCTTC ACGCAAGAAA GAGCGCAATG CTTCCAGTAG TTACGTCGTT TGGATACACA
GTCGCAGGGT TACTGGGAGG GGTAGTAGTG GTTGAGACGG TATTCGATTT TCCTGGAATC
GGGTATTGGA CAACGCAAGC ATTGTTGAAC GATGACGTAG GCGGCGTCAT GGCATCAACC
CTAATATTCG GTATAATACT GGTAGTAACG ACTTTAGTGC TGGACATCAT CTACGCAATC
ATAGATCCAA GGATTAGATA TTGA
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| Protein sequence | MFVLRRIAIL IPTLIGLTLL VFVLIHLQGN NLILSEYLNP RLTGQARELA IQRLTQEFHL
NQPVYIQYFY WLAQVFSGNF GYTNTPIFSG PVSTAIVLFL PNTVILSLFA ALLIWLIGIP
LGVFSAVNRD SAADQGIRVF SFTLYSMPIY LIAIALILIL GVYTGILPFS GEVSPQLVSG
LPWYVNGISY PTHVLLIDAI IHGDFAVAWN AFLHLIMPAL TLALAVMAGI IRILRASMLE
TLEQDYIKLA RAKGVPEKVV NNLHARKSAM LPVVTSFGYT VAGLLGGVVV VETVFDFPGI
GYWTTQALLN DDVGGVMAST LIFGIILVVT TLVLDIIYAI IDPRIRY
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