| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2154 |
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| Symbol | |
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| ID | 5104893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2068439 |
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| End bp | 2070790 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640508045 |
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| Product | DNA polymerase II |
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| Protein accession | YP_001192217 |
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| Protein GI | 146304901 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | [TIGR00592] DNA polymerase (pol2) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000768017 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000641936 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAGTGG ACATTTTCAT CTTAGATTTC TCTTATGATG TGGAGGACGG AAAGCCAGAA
ATTTACATAT GGGGGATAGA TAGGGAAGGA AATAGGGTAG TTATACTTGA GAAGAGTTTC
AGGCCTTACT TCTATGTTAC TCTGAAAGAA GATGCCAACG TTAACGAAGC CATCACCCAG
ATCAAGAGGC TGTCAAGGGA CCAGTCTCCC ATAACATCAG TTACGGAACA TGAGATGAAG
TATTTTGGAA GACCGCAGAA GGTCCTGCGG GTTGAGACTG TTATTCCTGC CCTTGTGAGG
ACTTACAGGG AGGAGATCGC TAAACTGAAA CCTGTGAAGG ATGTCCTTGA GGCCGATATT
AGATTTTACA TGAGGTATTC CATTGATACT GGAGTTAGAC CATTCTATTG GCTCTCGGCT
GAGGTATCTC AGGTAGAGAG GAAAGATCTT AGGGTAGCGA AGGTCTACGA GCTAAAGAGG
ATTGAGAGAG TCTATGAGGA CTCTCCTCCG CAGCTCAGGT TCATGGCTTT CGATATAGAG
GTCTTTAACA AGTATGGTTT TCCGAATCCT AGGAGGGACC CCATTATCGT TATTGGTGTC
TGGACCGATA ACGGATCGAA GCAGTTCGTC AACAACGATC AGGACGATCT AAAGATTTTG
AGGGATTTCT CAAAATTCGT TGTCGAGTAT GACCCAGACG TCATCCTGGG GTATAATTCC
AACGGGTTTG ATTGGCAGTA CATGCTGGAA AGAGCCTCAG TAAGGGGAAC AAAGCTAGAC
ATAGGGAGGA AGGTTAACTC TGAACCAAGC CAGGGAACAT ACGGTCACTA CTCCGTAGTA
GGAAGGCTTA ACGTTGATCT CTACGGCTTC GCGGAGAGTC TCGAAGGTGT GAAGGTTAAG
AGTCTAGACA ATGTGGCAGA CTATCTTGGA ATCTTGCCTA AAAATAAGAG AACCAACCTT
GAATGGTATC AAATTCCTGA GTATTGGGAA GACCCTAAGA GGAGAGAGGT TGTTCTTAAG
TACAATCTGG ACGACGTAAA GACTACATAC CTTCTCAGGG ACGTGTTCTT TAACTTTGGC
GAACAATTAA CTGTAATTTC AGGTCTTCCG CTGGATCAGT TATGCATGGC CAGTGTGGGA
CACAGGGTAG AATGGCTTTT AATGCGACAG GCAAAGCAGT TCAACGAGTT AATACCTAAC
AGGGTTGAGA GGAGATACGA GGGATATAAG GGCGGTCTGG TTATAGAGCC AAAGCCTGGA
CTTCATGAGA ACGTAGCTGT TCTGGATTTC AGCTCCATGT ATCCCTCCAT CATGATAAAG
TATAACATAG GTCCAGACAC CCTGGTACAG GGAGAGTGCA ACGATTGTTG GGTAGCTCCC
GAAGTTGGTT ACAAATTCAG AAAGGACGTG GATGGATTTT ACAGAAGTAT ACTTAACTTC
CTTCTTGAAG AGAGAAGGAA AACCAAAGAT CAGATGAGTC AGGCCAAAGA CGAGTATGAG
AAACGTAGGT TGGATGAGAG GCAGAGGGCT CTCAAGATCA TGGCCAACGC CATGTACGGT
TACATGGGCT GGTTAGGCGC AAGGTGGTAC AGCAAGGAGG GTGCGGAAGC GGTCACAGCG
TGGGGAAGAC AAACCATTAT GACGGCAGCT GAGATTGCCA AGAATTCAGG ATTTGAGGTA
ATCTATGGGG ATACGGATTC CATTTTCGTT AAGGGAGATA TGTCCTCTGT TGAGTTGTTG
ACTCAAAAAA TAGTCCAGGC CCTCGATCTA GATATAAAAG TAGATAAAAA ATACAAAAAA
GTATTCTTTA CAGAAAATAA AAAGAGATAT GCCGGTCTCA CATTCGATGG GAAGATAGAC
ATCGTTGGGT TTGAGGCCAT AAGGGGAGAT TGGTGTGAAT TAGCCAAGGA CACACAGAGG
ATGGTCATAG AGAGGATCCT GCTCAAGGGA GTGGACGACG CCGTTAAGGC AGCTAAGGAG
GTCATAATGA AGGTAAAGAG GAGAGAGTTC GAGCTACATG ATATAGTGAT ATGGAAGTCA
CTGGACAAGA GTCTAGACGA GTATGAGGTG GATGCGCCCC ACGTAATAGC TGCCAAGAAG
GCCATAAACG CGGGTTACGC CATAATGAGA AATGGCAAGA TAGGCTATGT GGTGGTAAAG
GGAGCAGGAA GAGTATCTGA TAGGGTTGAA CCCTATTTCA TGGTTAAGGA TAAGACAAAA
ATTGATATCG ATTACTACGT CGAGAAGCAG ATAATCCCAG CAGTAATGAG AATATTGGAA
CCTTTTGGGG TAAAAGAAAA TAATTTGAAG GGAGGAGGAA TAGATATAAT GGACTATTTT
AGGGACCGAT AA
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| Protein sequence | MRVDIFILDF SYDVEDGKPE IYIWGIDREG NRVVILEKSF RPYFYVTLKE DANVNEAITQ
IKRLSRDQSP ITSVTEHEMK YFGRPQKVLR VETVIPALVR TYREEIAKLK PVKDVLEADI
RFYMRYSIDT GVRPFYWLSA EVSQVERKDL RVAKVYELKR IERVYEDSPP QLRFMAFDIE
VFNKYGFPNP RRDPIIVIGV WTDNGSKQFV NNDQDDLKIL RDFSKFVVEY DPDVILGYNS
NGFDWQYMLE RASVRGTKLD IGRKVNSEPS QGTYGHYSVV GRLNVDLYGF AESLEGVKVK
SLDNVADYLG ILPKNKRTNL EWYQIPEYWE DPKRREVVLK YNLDDVKTTY LLRDVFFNFG
EQLTVISGLP LDQLCMASVG HRVEWLLMRQ AKQFNELIPN RVERRYEGYK GGLVIEPKPG
LHENVAVLDF SSMYPSIMIK YNIGPDTLVQ GECNDCWVAP EVGYKFRKDV DGFYRSILNF
LLEERRKTKD QMSQAKDEYE KRRLDERQRA LKIMANAMYG YMGWLGARWY SKEGAEAVTA
WGRQTIMTAA EIAKNSGFEV IYGDTDSIFV KGDMSSVELL TQKIVQALDL DIKVDKKYKK
VFFTENKKRY AGLTFDGKID IVGFEAIRGD WCELAKDTQR MVIERILLKG VDDAVKAAKE
VIMKVKRREF ELHDIVIWKS LDKSLDEYEV DAPHVIAAKK AINAGYAIMR NGKIGYVVVK
GAGRVSDRVE PYFMVKDKTK IDIDYYVEKQ IIPAVMRILE PFGVKENNLK GGGIDIMDYF
RDR
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