| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2120 |
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| Symbol | |
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| ID | 5104413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2039472 |
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| End bp | 2040677 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640508009 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001192183 |
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| Protein GI | 146304867 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.265686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAT GGGAAGGCTT CTTCTCAAAT GAAACCAAGG GGCTTAAGTC CTCAGAGATA
AGGGACTTAC TAAAGCTCAC CGAGGGAAAA AATGTAATAA GTTTCGCTGG CGGTTTACCT
GATCCCTCCA CTTTCCCGGT AGAGGACATA AAAAAGATAA CAGATGAGAT ACTTGAAACT
AAGTCCTCGT CTGCACTACA ATATACCGCA ACAGCAGGAG TTGCGGAGCT TAGGAAACAG
TTAGTATCTT TCTCGGGACT TAGGGGAATC ACCGGGATAA GTGAAAATAA TGTTTTCGTG
AGCGTGGGGA GTCAGGAGGC CCTCTTCATC CTATTTAATG TCCTCGTAGA TCCAGGAGAT
AACGTGATTG TGGAGAAACC CACTTATCTT ACCGCCCTCA ATGTCCTTCG TACCAGAAAG
CCCCAATTTC ATGGAGTTAC TGTCACAGAT AAGGGACCTG ACCTACACGC TCTCGAGTCC
CAGCTAAAGA AGCTGAAATC GGAAGGGAAG AGGATTAAAC TCATGTATGT TATTCCCACA
GCTCAGAACC CTGCTGGCAC AACCATGTAC CTGGATGATA GGAAGTATCT TATGGAACTT
GCCTCCTCAT ATGACTTCTT GGTAGTGGAG GATGATGCGT ACGGATTTCT GGTGTTCGAG
GGAGATAACC CTCCCCCTCT CAAGGCATTA GACAAGGAGG GTAGAGTAAT CTATCTTGGT
ACCTTTAGCA AGATCCTATC TCCAGGTCTT AGATTAGGAT GGATAGTGGC CGACGAAGAA
ATAATAAGGG AAGTGGAGCT CTTCAAGCAA AACGTGGACC TTCACACGCC TTCATTGAAC
CAGTTTATAG CTGCAGAGGC CATAAGGAGG GGGGTAATAC AATCTAACTT GCCCAAAACC
AAGGCCCTCT ACAAACAGAA GAGGGACTAC ATGATACAGG CAATGGACAA GTACTTCCCA
TCTGTAGTGA AGAGAACTAA GCCGGTGGGT GGAATGTTCG TGTTCACTTG GTTACCTGAG
AAGTTCAATA CCACTCAACT ACTGCAAGAG GCTATGTTAA AGGGAGTGGC CTACGTGCCA
GGTAATAGCT TCTATTACGA CTATAGTGGG GCAAATACCA TGCGAATAAA CTTCAGTTTC
CCCAGTAAGG AGGAGATAGA GAAGGGTATA GAAATCTTAG GTAATCTAAT AAAATCTAAG
CTATGA
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| Protein sequence | MGKWEGFFSN ETKGLKSSEI RDLLKLTEGK NVISFAGGLP DPSTFPVEDI KKITDEILET
KSSSALQYTA TAGVAELRKQ LVSFSGLRGI TGISENNVFV SVGSQEALFI LFNVLVDPGD
NVIVEKPTYL TALNVLRTRK PQFHGVTVTD KGPDLHALES QLKKLKSEGK RIKLMYVIPT
AQNPAGTTMY LDDRKYLMEL ASSYDFLVVE DDAYGFLVFE GDNPPPLKAL DKEGRVIYLG
TFSKILSPGL RLGWIVADEE IIREVELFKQ NVDLHTPSLN QFIAAEAIRR GVIQSNLPKT
KALYKQKRDY MIQAMDKYFP SVVKRTKPVG GMFVFTWLPE KFNTTQLLQE AMLKGVAYVP
GNSFYYDYSG ANTMRINFSF PSKEEIEKGI EILGNLIKSK L
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