| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2110 |
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| Symbol | |
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| ID | 5104403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2030667 |
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| End bp | 2031359 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640507999 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001192173 |
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| Protein GI | 146304857 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAGTGTG AAGGAAAGGA GATTGTAAGT AGGTTAGATA GAGCCTACAA GATTAAATCT
GAGGATTTCC TGGCGATAGA AATATGGGAG AAAACTAGGG ATCCTTTCAA GGTCCTTATA
GCGACCATTT TGACCCAGAA TACCACAGAT AAGGGAGCCA AGAAAGCGTA CGAGGAACTG
GATAAAGAGG TTGGAATAAC TGCCGAAGGG CTTAGTAGAG CCGATCCAGA GGTGATAAAG
AGGTGCATTA GAAAGGTCGG CCTTCACAAT AACAAGACTA AGGTGATTAA GGAAGTGTCA
ACGAAAATTT TGAATGAGTA TGGTGGAGAT ATCAACAAGG TACTTGACCT AGGGTTACCA
AAGGCTAGGG AGAAATTGGT GGAGCTCCCA GGCGTTGGGA AGAAGACTGC AGACGTCTTA
TTAATAACTT GCAGAGATTA TCCAGTGTTC CCCATAGACA CACATATCTT CAGGATTTCG
AAAAGGCTTG GTATTGATGG AAACTATGAC AAGGTAAGTT CGTTCTGGAG AGAAGTTTCG
GATAATCTCA GGTTGAGGGC ACATCTACTA CTCATTACTC ACGGTAGAGC TACATGCAAA
GCAATTAAAC CTAAATGTGA CACTTGTGTA CTTAATGACT GCTGCGAGTA TTACGCTAGA
CTACGTGGAT CCCAGGGACC TGAAACCTCA TGA
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| Protein sequence | MKCEGKEIVS RLDRAYKIKS EDFLAIEIWE KTRDPFKVLI ATILTQNTTD KGAKKAYEEL
DKEVGITAEG LSRADPEVIK RCIRKVGLHN NKTKVIKEVS TKILNEYGGD INKVLDLGLP
KAREKLVELP GVGKKTADVL LITCRDYPVF PIDTHIFRIS KRLGIDGNYD KVSSFWREVS
DNLRLRAHLL LITHGRATCK AIKPKCDTCV LNDCCEYYAR LRGSQGPETS
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