Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2092 |
Symbol | |
ID | 5104386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2014170 |
End bp | 2014814 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640507982 |
Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
Protein accession | YP_001192156 |
Protein GI | 146304840 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1010] Precorrin-3B methylase |
TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGG TTGTGGGGAT AGGAGCTGGT GGAGACACCC TTACGCTTAA GGCAGTAAAG GAGCTGAGAA GTGCTAGCGT AGTTATAGGC TACTCTAGTT ACGTTGATCT AGTCAAGGAT TTCCTTAATC CCGACGCTCA GATCATGGAA AGCAAGGTAG AGGAAATAGA GTTGAGGGTT GCTCAAGCTC GCGAAATGAA GGACAGGAAC ACCGTAGTGA TCAGTTCTGG CGACCCTATG GTTTTTGGCA TGGGATCTCG CCTGTATGGA GACGCTGATG AGGTGATTCC AGGGATCACC GCAATTAGCC TCGCCGCTAG CCTGCTAAAG ATACCTCTTG ATGATTACGC CGTGATAAAT GCTAGCACAT ACTCAACAAC TCTGGACAAA ATCCTAGAGA AACTGAGGGC GACAATAGAG GCAAATTTCA CAATAGGGAT ATACAACCTT AATCCCGTGG GAAGGAGAGG GGACGCAAAG ATGATAGAGA AGGAGATTAA GGATAAGGCG AGGGGATGGA ACTTCTACAT AGTTCGCAAC GCTATGAGGA GAGAACAACG GGTTATTCAT GGAAAGGTCG AGGAGTTGAA CATTGACTAC GTGGATATGA ACTCGCTTCT CGTGCTCAAG AGATGGTTCA GATGA
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Protein sequence | MIKVVGIGAG GDTLTLKAVK ELRSASVVIG YSSYVDLVKD FLNPDAQIME SKVEEIELRV AQAREMKDRN TVVISSGDPM VFGMGSRLYG DADEVIPGIT AISLAASLLK IPLDDYAVIN ASTYSTTLDK ILEKLRATIE ANFTIGIYNL NPVGRRGDAK MIEKEIKDKA RGWNFYIVRN AMRREQRVIH GKVEELNIDY VDMNSLLVLK RWFR
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