| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2071 |
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| Symbol | |
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| ID | 5105051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1988884 |
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| End bp | 1989519 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507961 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001192135 |
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| Protein GI | 146304819 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTCGT TGCAGGACAT TAGCAACCAG GTCATAGCTT GCCATAAATG CTCCCTATCT
AGAACTAGGA CCCATGCGGT TCCGGGGGAA GGAAATCCAA CCAGTGACGT AGTTTTCGTT
GGAGAGGCGC CTGGAGCTAA AGAGGATGAA ACTGGAAGAC CTTTCGTGGG TTCAGCTGGT
CAATTATTGA CCGAGTTAAT CCGAAAGTAC TTGAGGAGAG ATCGCTCCGA GATTTACATT
ACCAACATAG TAAAATGCAG ACCGCCAAAT AACAGGGATC CAGAGAAGGA GGAAATCGAG
GCTTGTTCAC CTTACCTTCT TACACAGATA AGGCTCATCA AACCAAAGGT GATTGTGACT
CTCGGAAGGC ATTCCACAGG ATTTTTCCAG ACGTTAGCGG GACTGCCTCT GACTCCTATA
TCACGTTGTC ACGGAAAACC TTTTCACCTG GACCTGGGGT ATGGTACAGT TACCGTTTTT
CCGACATATC ACCCTGCTGC CGCTCTTTAC AATCCTCCTC TCAAGCGAGA TTTAGAGGAG
GATTTTCAAA GGCTCTCCAA ACTCGTTTCA ACAGGTTCAA AAGCTACAAC TCTTGATAGG
TTCCTGGATC TAGATGGATC TGGGAATAAG GGGTAA
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| Protein sequence | MSSLQDISNQ VIACHKCSLS RTRTHAVPGE GNPTSDVVFV GEAPGAKEDE TGRPFVGSAG
QLLTELIRKY LRRDRSEIYI TNIVKCRPPN NRDPEKEEIE ACSPYLLTQI RLIKPKVIVT
LGRHSTGFFQ TLAGLPLTPI SRCHGKPFHL DLGYGTVTVF PTYHPAAALY NPPLKRDLEE
DFQRLSKLVS TGSKATTLDR FLDLDGSGNK G
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