| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2026 |
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| Symbol | |
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| ID | 5105248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1954244 |
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| End bp | 1955467 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507914 |
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| Product | amidohydrolase |
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| Protein accession | YP_001192090 |
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| Protein GI | 146304774 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.761901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAGTAT CAAATAGAAC GTATACACTG AGGAATTGCG CCTTTGCCGT TGATTACAGT
CACGTCGAGG GGCCAACGAA CATAGTCGTC GAAGACGGTT TCATTAAGCA CGTTGGTAAG
GAGGTTGAAG GAGACGAGTT GGAGTGCAGT GAGTACGTGG TAATGCCTGG TTTGGTGAAT
GCCCATACTC ACTCAGCCAT GACAGTCCTG AGGGGTGTAT TTGACGACGG GGAACTTCAC
GAGTGGTTAG CTCGAATGTG GGACGAAGAA AGGAAGTTAA CCAGGGAGAT TATGGCTGTA
GGTTCAGAAA TCGCAGTGAT TGAGATGATC TCCTCTGGGA CAACGGCCTT CGTTGATATG
TACTTCAACC CTGACCAGAT AAGGGATATC TCCACTCAGT ATGGGATTAG GGCGAGAGCG
GGCCCAACTC TCATGAAAGA CAAGAGTGTC GATGAAACCG TAAGGGAACT ACGTGCACTG
GGGGAAAGTG AGTTCTTTAG GCCCATCGTT AACGTCCACA GTCTCTATGC CACGGACCTT
CAGAAGCTTA GGGAGCTAAG AGATAACCTG AACCGAGGGT ATCATCTCCA CATTCATCTT
TCAGAAACAA GGGAAGAGGT CTTCCAGATA AAGAGAAGAT ATGGGATGTT CCCGGTGGAG
CTCATTCACA GGGAAGGTCT AACGGAACGT GTGCATGGTG TACATCTAGG CTGGATAACC
TCATGGGAAC TCAACTATCT GAGAAGTTCC ATTGCGGTCA CTCATTGTCC AACGTCTAAC
ATGAAGCTTG CCACCGGAGG GGCTTTTCCC ATGAAGGAGG CGTTGACTCA AGGACTTAAT
GTAACCATTG GGACAGATGG TGCAGCGAGC AATAACTCCC TCAACATGTT TCAAGAGATG
AAAATGGCAG TCTTGCTACA GAGACATAAT TACTGGTCCA CAGGAATAAC TGCAGTTGAC
GTGTTTAGGG CATCATCAGT TAACGGGTAT AAGATGCTGG GCATACGCGG AGGGGAGATT
AGGCCCGGAT ACGTGGCTGA TCTAGTCCTG CTAAGTAAGT ATGAGGTTTA TCCATTAACC
AAGGAGAGAC TTCTATCTCA TCTAGTTTAC AATCCGCCAA AGGAAGTTGA GAAGGTTATA
ATCCAAGGAA AGATTGTTTA TCAAAAGAAT GACTTTAGGG ATAGGTTGAA GAAACTTTTA
GAGAAGTTAA GCCTTTACCT CTAA
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| Protein sequence | MGVSNRTYTL RNCAFAVDYS HVEGPTNIVV EDGFIKHVGK EVEGDELECS EYVVMPGLVN
AHTHSAMTVL RGVFDDGELH EWLARMWDEE RKLTREIMAV GSEIAVIEMI SSGTTAFVDM
YFNPDQIRDI STQYGIRARA GPTLMKDKSV DETVRELRAL GESEFFRPIV NVHSLYATDL
QKLRELRDNL NRGYHLHIHL SETREEVFQI KRRYGMFPVE LIHREGLTER VHGVHLGWIT
SWELNYLRSS IAVTHCPTSN MKLATGGAFP MKEALTQGLN VTIGTDGAAS NNSLNMFQEM
KMAVLLQRHN YWSTGITAVD VFRASSVNGY KMLGIRGGEI RPGYVADLVL LSKYEVYPLT
KERLLSHLVY NPPKEVEKVI IQGKIVYQKN DFRDRLKKLL EKLSLYL
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