| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2025 |
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| Symbol | |
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| ID | 5105247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1953606 |
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| End bp | 1954274 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507913 |
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| Product | putative ATP binding protein |
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| Protein accession | YP_001192089 |
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| Protein GI | 146304773 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2102] Predicted ATPases of PP-loop superfamily |
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| TIGRFAM ID | [TIGR00289] conserved hypothetical protein TIGR00289
[TIGR00290] MJ0570-related uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.307354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTTT GTTCCCTTTT TTCGGGCGGT AAGGATAGCA CCTTTGCCCT GCACTGGGCA
GTATTGAAGG GATTTGAAGT AGAGTGTCTC GTAACTATAA TACCCAGGAG GAAGGACTCC
TGGATGTTCC AATATAATAA CGTGGAACTC ACAAGATATC AAGCGGAAGT CTTGGGACTA
CCCCTTCTTT CGATTAACTC GTCGGGGGAG AAGGACGTGG AACTCACTGA CCTTAGAAAG
GCCTTGGAAA TGGTGAAGTC GCAAGAGGCC ACGGGGATAG TCACCGGTGC CTTATTGTCT
GATTATCAAA GAATGAACAT TAACATTTTA TCAAGTGAGC TGGGCCTGAA GGTGTATTCC
CCCCTATGGA GAAAGGACCA AGAGAGGTAC ATGAGAGAGC TTGTGGAGTA CGGATTCGAG
TTCATTATCA CGTCTGCCAC AGCATATGGA TTCCCCTTTG ACCTCGTAGG AAAGGTAATC
AATAGGGAAG ATGTTGAAAG GATTCTGGAA AGGGCGAGAA AATTTGGTTT CAACCCGGCA
TTTGAAGGCG GTGAGGCTGA GACCTTCGTG GTTAACGCGC CATTGTTCAA AAGAAAATTA
ATTGTGGAAG GCAAGCCTGT TAAACTAGGC GAATTCGAGT GGGAGTATCA AATAGAACGT
ATACACTGA
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| Protein sequence | MKLCSLFSGG KDSTFALHWA VLKGFEVECL VTIIPRRKDS WMFQYNNVEL TRYQAEVLGL
PLLSINSSGE KDVELTDLRK ALEMVKSQEA TGIVTGALLS DYQRMNINIL SSELGLKVYS
PLWRKDQERY MRELVEYGFE FIITSATAYG FPFDLVGKVI NREDVERILE RARKFGFNPA
FEGGEAETFV VNAPLFKRKL IVEGKPVKLG EFEWEYQIER IH
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