Gene Msed_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2004 
Symbol 
ID5103391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1937307 
End bp1937960 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content49% 
IMG OID640507892 
Productphosphoenolpyruvate synthase 
Protein accessionYP_001192068 
Protein GI146304752 
COG category[S] Function unknown 
COG ID[COG3382] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCA GCATACAGGA AAATTGCGCA TCCATGGGAA TCTTCGTGAA ACACACCGAA 
GTCCTTGATC TCGTGAATGG TCAGGGAAGA TTTGAGGGGG AACTCTCAGC CGTAGAGAGC
AAATTTCGAT CTGACAATCC AGAGTCGCTC AAGGATATTC CTGTTATTAG GGCGTATAGA
GATTTTTACT GGAAGCTGGG GATAGACCCC ACAAAGACTA GGCCAAGCGG TGAAGCTCTT
AGAAGGAGAA TTGTCAGGAC CGGTAAGCTT CCCAGAATCA ATGATATTGT GGATGCTGGA
AACGTGGTTA GCGCGGAGAC CCTTGTCTCC ATCGGAATAT ATGACTTGGA CAAGATCAAG
GGCGAGCCTA ATCTAGTTCT CAGCTCAGGC GGAGAGAAGT TTGAGGGGAT TGGGAACAAG
GTCGAGGTTT TGTCACCTGG TATTCCGATC ATGGTCGACG GCGAGGGTAA GGTTATGCAC
ATCTTTCCTC ACAGGGACTC GGTGCTCACC AGCGTGGGTC TATCCACTAA AAACGTGTTA
ATAGTGGGGG CCGGAGTTAC TGGGATAGAC CCATCCCTGG TCGAGGAGGC AGTGAGACTT
ACTGCTAAGC TATTAAGTAG GATCGGTGGT AAGATAGTCC ATGAAGTCCA ATAG
 
Protein sequence
MRISIQENCA SMGIFVKHTE VLDLVNGQGR FEGELSAVES KFRSDNPESL KDIPVIRAYR 
DFYWKLGIDP TKTRPSGEAL RRRIVRTGKL PRINDIVDAG NVVSAETLVS IGIYDLDKIK
GEPNLVLSSG GEKFEGIGNK VEVLSPGIPI MVDGEGKVMH IFPHRDSVLT SVGLSTKNVL
IVGAGVTGID PSLVEEAVRL TAKLLSRIGG KIVHEVQ