| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1966 |
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| Symbol | |
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| ID | 5103353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1903861 |
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| End bp | 1904508 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507854 |
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| Product | orotidine-5'-phosphate decarboxylase |
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| Protein accession | YP_001192030 |
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| Protein GI | 146304714 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACAGGG TGATACTCTC CCTCGACTCG CCCATCCCTG AAGAGACGTT AAGGAAACTT
AATGGGAAAG TGGCTGGAAT TAAGGTGGGA TGGCCTCTCC TACTTAACCT GGGTAAGGAG
AAAGTTAAGG AACTTGTGGG CCTCGTTGAT GGGATCAAAA TCCTCGATCT GAAACTTGCA
GACATAGATA ACACCATGAT ATTAATAGTG GACGAGCTAA AGGACATCAC GAACTCCTTT
ATAGCGCATG CCTTTGTGGG AGTGGAGGGA AGTCTTGCCT CCCTTAGCCA GAGGGTCGAC
CTCTTCTTGG TCCTGTCCAT GTCCCACCCA GGGTGGAACG ACGCCTTCTA TCCGTACCTC
AGGGAAGTGG CAAGAAGGGT TAATCCAAAG GGGTTTGTGG CACCTGCAAC TAGACCTTCC
ATGATCTCGA GGGTTAAGGG AGATTTCCCG GACAAACTGG TGATATCTCC AGGTGTAGGC
ACACAGGGGG CGAAACCTGG AATTGCCCTA TGCCATGGGG CAGACTACGA GATAGTGGGA
AGGAGCGTGT ATCAGTCAGC CGATCCCGTT CGGAAGCTGG AGGAGATAGT GAGGTCCCAG
GAGGAGGTTC TGAGTTCCTG TGAAGGAGCA AAAGATCGGG GTTCATGA
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| Protein sequence | MNRVILSLDS PIPEETLRKL NGKVAGIKVG WPLLLNLGKE KVKELVGLVD GIKILDLKLA
DIDNTMILIV DELKDITNSF IAHAFVGVEG SLASLSQRVD LFLVLSMSHP GWNDAFYPYL
REVARRVNPK GFVAPATRPS MISRVKGDFP DKLVISPGVG TQGAKPGIAL CHGADYEIVG
RSVYQSADPV RKLEEIVRSQ EEVLSSCEGA KDRGS
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