| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1917 |
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| Symbol | |
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| ID | 5103304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1863896 |
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| End bp | 1865671 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507805 |
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| Product | V-type ATP synthase subunit A |
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| Protein accession | YP_001191981 |
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| Protein GI | 146304665 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1155] Archaeal/vacuolar-type H+-ATPase subunit A |
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| TIGRFAM ID | [TIGR01043] ATP synthase archaeal, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000535851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.804968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGG GTAAAGTTGC AAGGGTGAAC GGGCCACTGG TTGTGGCCGA GGGTATGAAG
GATGCGCAGA TGTTTGAAGT AGTCGAAGTG GGCGAGCCTA GGCTAGTGGG CGAAATAACA
AGGATTGAGG GTGACAGGGC TTACATACAG GTATATGAGG ACACGAGCGG AATCAGACCT
GGTGAGCCAG TTTTTGGGAG TGGGGCTCCC CTATCAGTGG AGTTAGGTCC AGGCCTTCTC
GGTCAACTGT TTGATGGTCT ACTTAGACCT CTAGGAGAGA TCAAGGAAAT TACTAAGTCA
CCTTTCATCA AGAGGGGGAT AAAGTTACCA ACACTAAATA GGGAGAAAGA ATGGCACTTC
GTCCCAAAGA TGAAGAAGGG AGATAAGGTA GAGCCAGGTG ATATTCTAGG AGTGGTACAG
GAGACAGGAC TTGTAGAGCA CAGAATACTC GTTCCTCCTT ACGTTCACGG AAAATTAAAG
GAGGTTGTTG CAGAGGGCGA TTACAAGGTT GAAGACAACG TCGCAATTGT GGACATGAAC
GGTGACGAAG TTCCAGTGAA AATGATGCAG AAGTGGCCAG TTAGGGTTCC AAGACCCTTC
AAGGAAAAGC TAGATCCAAG CCAGCCGTTA CTGACTGGGG TTAGAATACT TGATACTATA
TTCCCCATAG CAAAGGGAGG TACTGCGGCG ATTCCAGGGC CCTTCGGGAG TGGAAAGACA
GTAACTCTAC AAAGCCTATC CAAGTGGAGT GAGGCTAAGA TTGTCATTTT CGTTGGATGT
GGAGAGAGAG GAAACGAAAT GACTGACGAG CTAAGAAGCT TCCCCAAACT GAAGGATCCG
TGGACTGGAA GACCCCTTCT AGAGAGGACA GTGATGGTGG CAAACACCAG TAACATGCCC
GTAGCAGCTA GGGAAGCAAG CATTTACGTA GGTGTTACCC TAGCTGAGTA CTTCAGGGAC
CAGGGATACG ACGTGCTTAC CGTGGCTGAC TCGACCTCCA GATGGGCTGA GGCGCTAAGG
GACCTAGGAG GGAGAATGGA GGAGATGCCA GCCGAGGAAG GGTTCCCAAG CTACCTCTCC
TCCAGAATCG CTGAGTACTA TGAGAGGGCT GGAAGAGTTA GAACTCTAGG TAATCCAGAG
AGGTACGGCT CAGTTACCTT AGCGTCTGCA GTTTCACCAC CAGGCGGTGA CTTTACTGAA
CCAGTTACTA GCACAACACT TAGATTCGTC AGGGTCTTCT GGCCATTGGA CGTCTCCTTA
GCTCAGGCCA GACATTACCC TGCAATAAAC TGGCTCCAGG GGTTCTCATC CTACGTTGAC
CTGGTATCTG ACTGGTGGAT CAAGAACGTC GACCCAGATT GGAGAATTAT GAGGGACTTC
ATGGTTAGGA CACTTCTAAG AGAGGATGAG TTGAAACAGA TAGTGAGGCT AGTGGGTCCA
GAGTCCCTTG CAGAAAAGGA TAAGCTAACG TTGGAGGTTG CAAGGCTGAT CAAGGAAGCC
TTCCTGAAAC AGAACGCATA TGATGACATA GATGCCTTCT CGTCACCCCA GAAGCAGGCT
AGAATCATGA AGTTGATCTA CCACTATAAT CAATATGCAA CTAACGCCGT GGAAAGGGGA
ATACCAGTGA AAAAGATTGT GGACAAGATA ACTGTGGTTC CTGACATAAT TAGATCAAAG
GCTACTATCA AGAACAACGA GCTTCAGAAA TACGACGAAT TAGAGAACAA GTTAAAAGCT
CAGTTCGATG AACTCTTGAA GGAGGCTGGT GCTTAA
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| Protein sequence | MAQGKVARVN GPLVVAEGMK DAQMFEVVEV GEPRLVGEIT RIEGDRAYIQ VYEDTSGIRP
GEPVFGSGAP LSVELGPGLL GQLFDGLLRP LGEIKEITKS PFIKRGIKLP TLNREKEWHF
VPKMKKGDKV EPGDILGVVQ ETGLVEHRIL VPPYVHGKLK EVVAEGDYKV EDNVAIVDMN
GDEVPVKMMQ KWPVRVPRPF KEKLDPSQPL LTGVRILDTI FPIAKGGTAA IPGPFGSGKT
VTLQSLSKWS EAKIVIFVGC GERGNEMTDE LRSFPKLKDP WTGRPLLERT VMVANTSNMP
VAAREASIYV GVTLAEYFRD QGYDVLTVAD STSRWAEALR DLGGRMEEMP AEEGFPSYLS
SRIAEYYERA GRVRTLGNPE RYGSVTLASA VSPPGGDFTE PVTSTTLRFV RVFWPLDVSL
AQARHYPAIN WLQGFSSYVD LVSDWWIKNV DPDWRIMRDF MVRTLLREDE LKQIVRLVGP
ESLAEKDKLT LEVARLIKEA FLKQNAYDDI DAFSSPQKQA RIMKLIYHYN QYATNAVERG
IPVKKIVDKI TVVPDIIRSK ATIKNNELQK YDELENKLKA QFDELLKEAG A
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