| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1899 |
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| Symbol | |
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| ID | 5103286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1842791 |
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| End bp | 1843300 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507786 |
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| Product | NADH dehydrogenase subunit I |
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| Protein accession | YP_001191963 |
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| Protein GI | 146304647 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
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| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00550248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.26939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTCAG TAAAAATAAA GGAATACAAA AAGGGAGAGT CTCCATTTAA CGTGGTCTCC
GGGCATCTTC AGGCCGTTGG GGCTGGGATA AAGTATTTCG TTAAGCCCCA GCGGATAACC
CTGAAGTACC CGGACGAGTC AATGTCCCTT CCCACAGGTT ACAGGGGAAT GATAAGGCTG
TACAAGGACG TGTGCATTGG CTGTACCCTG TGTGCCATGG TGTGTCCCGC GGATGCCATG
AAGATGGTCA CGGACCAGGG GAAGAAATTC CCCACAATCA ACTACGGTAG GTGCGTTTTC
TGTGCCTTCT GCGTGGACAT TTGTCCCGTG GACGCACTTA AGGAGACAGG GGTACATGAT
GCTGCCTTCT CTAACAGAAG GGAGCTGATA TTCAATCCAG AGAGATTTGA CCAAGACTTC
GATCAACCTC CCCTGCGACC TGTGGTGAGG AAAGTAAAGG CGGTAATAGA TGAGGACAAG
GGGATAAAGT ATGTACCTGA CACAGAGTGA
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| Protein sequence | MDSVKIKEYK KGESPFNVVS GHLQAVGAGI KYFVKPQRIT LKYPDESMSL PTGYRGMIRL
YKDVCIGCTL CAMVCPADAM KMVTDQGKKF PTINYGRCVF CAFCVDICPV DALKETGVHD
AAFSNRRELI FNPERFDQDF DQPPLRPVVR KVKAVIDEDK GIKYVPDTE
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