Gene Msed_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1855 
Symbol 
ID5104123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1802153 
End bp1803076 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content54% 
IMG OID640507740 
ProductATPase, BadF/BadG/BcrA/BcrD type 
Protein accessionYP_001191919 
Protein GI146304603 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.591681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGAAAG GATTGGCAGT TGAGGGAGGA GGTACTAAGA CAACTGCAGT TGTGTTTCAG 
GGACTTGAGA TCCTAGGCCT GGGGATCTCT GGATCCTCGA ATTTCGTCGA GGTAGGCAAG
AGGGCAGAGC ACACCCTGAG GAAGGCAATC CAGAGGGCCC TAGACATGGC TAACCTCTCG
CTCGCGGAAG TGGAGAGGGC GTCCTTTGCC CTCGCAGGGA TAGGTGATTC CCCAAATTTC
ACCAGAATAG GGGAGAATCT AGTTAAGTCA ATCTTTCCCA ACTCCCTAGT GGTAAATGAC
GGAGTTGCGG CAGTGAAGCT TGCCCACCTC AACATGGATG GTGGAGCGCT TGTGGCAGGG
ACAGGTAACG TGGGTTACAT CCAAAAGGCC GGTGAACTCA AGAAGCTTGC CGGCTGGGGC
TGGTTTTTCG GAGATGAGGG ATCGGCTTCC TACATAGGGA AGAGGGGCAT AGCCATGGCC
ACGAGGGCGC TAGACGGGTT AATTGAGAGC AGACTTCCGG AGGAGGTTGA GAGATTCTTT
GGTGCCCCCA TCAGGGTTGT GATCGAGAGG CTCACGAAGA GACCCAATAA GAGGATAATT
GCGTCCTTTG CGAAGGTTGT GGACAAGTTG GCTGAAGAGG GCGACCCAGG GGCTAGGATC
GTGATGGATG AGGCGATTGC CTACATAGAC TCCATGCTGA CCAGGATGAG GAAGGAGGTG
GAGAGGGTTG CGGGAACAGG GGGAGTGTTT AGGTCCATGA TGGTTAGGCA GGCCTTTCCA
ACCCTGAAGG TATATGAGGG CTATCAGACC GTGATAGGGT CAATGGTTAT GCTCCTTGGT
GACGTTAAGG AGGAGGATAG GGACGAGTTG TTGAAGCAGT TGGAGAGGCT AAAGCCCAGG
AGAAGACAAG GTTCGCATTC ATGA
 
Protein sequence
MWKGLAVEGG GTKTTAVVFQ GLEILGLGIS GSSNFVEVGK RAEHTLRKAI QRALDMANLS 
LAEVERASFA LAGIGDSPNF TRIGENLVKS IFPNSLVVND GVAAVKLAHL NMDGGALVAG
TGNVGYIQKA GELKKLAGWG WFFGDEGSAS YIGKRGIAMA TRALDGLIES RLPEEVERFF
GAPIRVVIER LTKRPNKRII ASFAKVVDKL AEEGDPGARI VMDEAIAYID SMLTRMRKEV
ERVAGTGGVF RSMMVRQAFP TLKVYEGYQT VIGSMVMLLG DVKEEDRDEL LKQLERLKPR
RRQGSHS