Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1805 |
Symbol | |
ID | 5105368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1742226 |
End bp | 1744442 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640507704 |
Product | oligosaccharyl transferase, STT3 subunit |
Protein accession | YP_001191883 |
Protein GI | 146304567 |
COG category | [R] General function prediction only |
COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTTA AGGAAGTCTC CAACGTTCTC AGGAAGACAA CCCTTGTGGA TCTAGTAGTT GTGATAGGAA TCTCCATTAT CTCGATCGCT ATACGTGGCC TTAGTGCCAC CTATCCTCTC TCGATCAATG GTTTTGACTC ATGGTACCTC TTCTACAACG CGGTACTGAT AGCTCAAGCC CACGGGAATT GGTACGCCGT CCCTCCAGAC GTTCACTCTT GGTTTCCATC GGGTTACTTC ATCGAACTCG GTGACACCAT AGGGCTCCCC TTCATCTCAG CCCTACTTGC CCTACCCTTC TACTCTTCCT TTGGAGCAAA CGCAGTCTAC ACGGTAGTCC TCTTCCTGGA CATGGCTCTA GCAGGGCTAG GCGTTGCATC TGCTTACCTA GCTGTTGATG GCCTTACCAA GAGCAGGGTT GGGGCCGTGA TCGCGGGACT AGTGATAGCG GTCTCGCCTG CGCTAACTTA CAAGAATCTG GTGGGTGGCC TCCCCAAGAC CTCCTGGGGA GGGGTCTTCG TCCTCTTCTC AATCTACCTC CTGAACCTGG CCATAGAGAG GAAAAAGCCG TGGTACGGCG CAGTTGCCGC GGTGCCCCTC TTCCTAGCAG AGATATCCTG GGGAGGTTAC ACCTACATCG ACATAAGCCT TCTGGCAGCT GCCTTTCTGG CCATCCTCCT GAACAGGAAC GATGAGGTCA CAGTGAAGTC CTTCACGTTA ATGGGCGTCA TAACAGCCTT CTTGACCTCC TTCGCCCCCA ATAACATAGG ATTTCTATCA GGTGCAGCTC ACGGTCTCTC TCTCCTCCTT GTTTCGCTTC TCCTGTTTGT GGACCTTTAC CTAAGGAAGA TACTGCCGAA GGAGAGCTCG TTAACCAGGT CCTTAATACT CACCTCGTTC CTAGTCTTGA TCTTCGTCCT CGCCATAGGC GGTCTATCAG CTTTGAGGGC TACCCCTATT CCCTCTAGAT ATTACGCAAT CGTGGATCCC TTCTACCAGT TCACCGTGCC CATAGACAGG ACGGTGGCGG AGTATATACC TCAGCCGTTG ACTTCAATGC TCACTGACTT CGGCGTTGCC ATATTTCTAT CGGTGATTGG GATGTACTAC TTCCTCAGGG AGGGTAACCT CTCCGGGCTG TGGCTCCTCG TCTTGGGAGT GGCGAGCATA TACGGGACCT CGGAGCAACC CTATCTCTTC AACTACACGG TGTACATGGT CGCTCCCCTG GCAGGGGCAG GGATCTACTT CGTGGTGTCT AGGCTGAAAC AGGCCAGGGT GAGGGTTGCT CCCATCCTTC TCTTGGCGGT GGTTGGGATC TCCCTCGTGG CAGATGCCGG TTCAGCCATC ATGGCTAGCA ATACACCTAA TGCCATCATC ACCTCCGCTT CGCCCTACCC CGTGCCCAAC TATGCCTGGG TCACTACGCT TAACTGGCTT AGGACGCAAA CCTCACCTCA CGCCTTCGTC CTGAGTTGGT GGGACTACGG TTACTGGATT GAGGTGGTGG GAAATAAAAC CGTGATTGAC GAGAATAACA CGCTTAATAA TACGCAGATC AAGTTAATGG CTGAGATCTT CCTGAATAAC GAGACCTACG CGGCCCAGAT CCTCGAGAGG GACTTTCACG TCTACCCCTA CGGAAACCCC AACTACACAA TCCCCACTTA CATCGTGGCA TATGACGCGG TTACCATCTA CAGGGGACAG GAGGCCTTCC TTGGTTATCC CACGAACTTG GGCGGTCAGT TCCTAGGCTA TACCTCGAGC CTCGGGGACA TTGGGAAAGC CATGGGAGCA ATGACCGTGA TTGCGGGTTA CCCAGTGAAT GAGTACGTGA ATATTACACT TCTAAACCAG ACTGAGACGC AGATTGCCAG CGAATTCTCA TCAAATCCCA CGCTGGCTCA GGAACTTGTA AGCCTAGTGG GTAACTCGTT CCCGTTTGCG TGGACCCATC GCGCGTATCA GTCGCTGATA GCCAACATGT TCATTGAAGG ACTGCAGAGC CAGGGTTACC CCGTGATCGC CCCATTCAGT ACCCAAATCT CGACCTCTGG AGTCAGCCTT GGCACTCCTC TACCGCAAGT CAGAATGGAG TACTTCCAAC CAGTGCAGAT ATCAATGGAC CCACTTTACG GAAATGGAGA GTACCAGGTT TACATTATGG TAGTGGTGTA TCAGTTCGTC CAGCCCGGAT ATGTGGCACC TAACTGA
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Protein sequence | MALKEVSNVL RKTTLVDLVV VIGISIISIA IRGLSATYPL SINGFDSWYL FYNAVLIAQA HGNWYAVPPD VHSWFPSGYF IELGDTIGLP FISALLALPF YSSFGANAVY TVVLFLDMAL AGLGVASAYL AVDGLTKSRV GAVIAGLVIA VSPALTYKNL VGGLPKTSWG GVFVLFSIYL LNLAIERKKP WYGAVAAVPL FLAEISWGGY TYIDISLLAA AFLAILLNRN DEVTVKSFTL MGVITAFLTS FAPNNIGFLS GAAHGLSLLL VSLLLFVDLY LRKILPKESS LTRSLILTSF LVLIFVLAIG GLSALRATPI PSRYYAIVDP FYQFTVPIDR TVAEYIPQPL TSMLTDFGVA IFLSVIGMYY FLREGNLSGL WLLVLGVASI YGTSEQPYLF NYTVYMVAPL AGAGIYFVVS RLKQARVRVA PILLLAVVGI SLVADAGSAI MASNTPNAII TSASPYPVPN YAWVTTLNWL RTQTSPHAFV LSWWDYGYWI EVVGNKTVID ENNTLNNTQI KLMAEIFLNN ETYAAQILER DFHVYPYGNP NYTIPTYIVA YDAVTIYRGQ EAFLGYPTNL GGQFLGYTSS LGDIGKAMGA MTVIAGYPVN EYVNITLLNQ TETQIASEFS SNPTLAQELV SLVGNSFPFA WTHRAYQSLI ANMFIEGLQS QGYPVIAPFS TQISTSGVSL GTPLPQVRME YFQPVQISMD PLYGNGEYQV YIMVVVYQFV QPGYVAPN
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