| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1788 |
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| Symbol | |
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| ID | 5104788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1728686 |
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| End bp | 1729561 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507687 |
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| Product | ribonuclease Z |
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| Protein accession | YP_001191867 |
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| Protein GI | 146304551 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGG TTTACTTCAT TGGTACAGGT GGGGGAGCAC CATCTAGGAG AGGACTCCCA
GCTTACCTGG TGAGGAGGGA AGGCCTCTCC ATACTCATGG ACTGCGGTGA GGGAACACAA
ATAACCATGA TAAGGAACTC CTTGAACATC ATGAACGTTA ACGTAATTGC CATAACCCAC
CTCCACGCAG ACCACGTACT TGGGTTACCG TCACTGATCC AGACCATGGG GATGTACGAT
AGGAAGGAGA GACTATATAT CCTTGGTCCA GAAGGGCTTA AGGACTTGCT TACCGAGACC
TTTGAGAGAA CCTACTTTTC GCCCAATTTT CCCATAGAGT TTGTCTCAAG CTACGAGAGC
CAGGGCATTA GGGTGAGGCC CTTTAGAACC TGCCACGTGG TTCCCTCCCA GGGTTACCTT
GTGGAGGAGA AGGACACCGC AAACCTTGAT GCAGAGAGGT TGAGGAGGGA AGGGGTTACC
GACTGGAGGG TAATGAGGAT GCTTAAGGAG GGGAAGGAGG TCCCCTGGGG TGACAGGGTT
CTGAAACCTG AGGACTACTT GATCGTGAAG AGGGGAATAA GGATAGCTTA CACAGGAGAC
ACAAGGCCCT GTGAAACCGT AATCAACTCG GTCAAGGGAG TTGATCTTCT CCTCCACGAT
TCGACCTTTG AGCAGGGGAT TGACGCATCA GAGTACGGTC ACTCCACATC AACCGAGGCT
GCTACCGTAG CCAGGGAAGC AGAGGTCAAG AGGCTAGCCC TAATTCACAT AAGTGCCAGG
TACAGGGACA CGTCGGAGAT GTTGAAGCAG GCCAGGAGAA TTTTCCCCAT GTCCTTCGTC
CCAGAGGACC TTTCCTTCCT CAATCTTCGG GCATAG
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| Protein sequence | MMKVYFIGTG GGAPSRRGLP AYLVRREGLS ILMDCGEGTQ ITMIRNSLNI MNVNVIAITH
LHADHVLGLP SLIQTMGMYD RKERLYILGP EGLKDLLTET FERTYFSPNF PIEFVSSYES
QGIRVRPFRT CHVVPSQGYL VEEKDTANLD AERLRREGVT DWRVMRMLKE GKEVPWGDRV
LKPEDYLIVK RGIRIAYTGD TRPCETVINS VKGVDLLLHD STFEQGIDAS EYGHSTSTEA
ATVAREAEVK RLALIHISAR YRDTSEMLKQ ARRIFPMSFV PEDLSFLNLR A
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