| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1757 |
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| Symbol | |
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| ID | 5104757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1693494 |
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| End bp | 1694834 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507652 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_001191836 |
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| Protein GI | 146304520 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.941567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.290924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTAGACG GAATAAGGGA CGCGGTAAGG AAATTTTTAG GAGGAAACAC TTCCTACGAG
GTAGCTGTAG AGGAGTTCAT TAAGGACATT CAGAAGGCCC TTATTTCGTC AGATGTTCAG
GTTAAACTTG TTTTCTCACT TACCAACAAG ATTAAGGAGA GACTCAAGAA GGAAACTCCT
CCCTCAAACC TGGAGAGGAG AGAGTGGTTC ATCAAGATAG TTTATGACGA GCTTTCAGCC
CTGTTTGGAG GGGATAAGGA ACCAGAGGTT AACCCCAAGT CAATCCCATG GGTTATCATG
CTAGTGGGAG TCCAGGGCAC TGGAAAGACC ACAACCGCAG GCAAACTAGC TTACTTCTAC
AAGAAGAGAG GTTATAAGGT GGCCTTGGTT GGGGCAGACG TATATAGGCC AGCTGCACTG
GAGCAACTTC AGCAGATAGG GAAACAGATA AACGTCCCCG TTTACGGAGA ACCTGGAAGT
CAGGACGCAG TTGGAATAGC CAAAAGAGGC GTGGAGAAGT TCCTTTCAGA GAGGTACGAA
CTAGTGATCG TGGATACGGC GGGAAGACAC GGATACGGCG AGGAGGTTAA ACTCCTGGAG
GAAATGAAGG ACATCTACGA AAAGATCAAG CCCAACGAGG TTATCCTAGT TATAGATGCC
TCCCTGGGAC AGAAGGCCTA CGATCTGGCC AAGAGGTTCC ATGAGGCCAG CAACGTTGGT
TCCATCATCA TCACCAAGAT GGACGGTACC GCGAAGGGAG GGGGTGCCCT CTCTGCCGTA
GCGGCAACAG GTGCCCCAAT AAAATTCATC GGTGTGGGCG AGAAGATAGA CGAACTGGAG
GTCTTCAATC CCAGGAGGTT TGTGGCCAGG ATCCTCGGAA TGGGAGACCT GGAGGCTATC
ATAGAGAAGA TGAAGGCCAT GGAGGATTAC GAGGGGATAC AGAAGAAAAT GGGGGAGGTC
ATGACAGGGA AGTCCAAGCT CACCCTGAGG GACATGTACA AGCAGATAGT TGCCGTGAGG
AAAATGGGTC CACTCTCTAA GATCCTGCAG TTGATACCTG GAATGAATAT GATGGGGGAT
ATCCCCGAGG ACCAGGTTAA GGTAGGAGAA CAAAAAATGC AGAGGTGGCT TTCCATCATG
AACTCAATGA CCTATCAAGA ACTGGACAAT CCCTCAATTA TTGATAAACA GAGAATGAGG
AGGATAGCCA TGGGATCTGG GACGGAGGTT GAAGAGGTAA GGGAACTCAT AGAGCATTTC
AATACGGTAC AGAGAACTCT TAAGATGCTC AAGAGAAGGA AAAAGGATGT CGAAAAACTC
TTCGGCCAAA TGGGTGGCTG A
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| Protein sequence | MLDGIRDAVR KFLGGNTSYE VAVEEFIKDI QKALISSDVQ VKLVFSLTNK IKERLKKETP
PSNLERREWF IKIVYDELSA LFGGDKEPEV NPKSIPWVIM LVGVQGTGKT TTAGKLAYFY
KKRGYKVALV GADVYRPAAL EQLQQIGKQI NVPVYGEPGS QDAVGIAKRG VEKFLSERYE
LVIVDTAGRH GYGEEVKLLE EMKDIYEKIK PNEVILVIDA SLGQKAYDLA KRFHEASNVG
SIIITKMDGT AKGGGALSAV AATGAPIKFI GVGEKIDELE VFNPRRFVAR ILGMGDLEAI
IEKMKAMEDY EGIQKKMGEV MTGKSKLTLR DMYKQIVAVR KMGPLSKILQ LIPGMNMMGD
IPEDQVKVGE QKMQRWLSIM NSMTYQELDN PSIIDKQRMR RIAMGSGTEV EEVRELIEHF
NTVQRTLKML KRRKKDVEKL FGQMGG
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