Gene Msed_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1739 
SymbolgatA 
ID5105102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1674683 
End bp1676098 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content47% 
IMG OID640507634 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001191818 
Protein GI146304502 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATGG AGATAGTAAA TGACCTGAGG AATGGAAATC TATCCCCAGA CGAGTACGTG 
GGTAGAACCT TTGATAGGAT TAGAAGGGTA GAGGAGAAGG TTAGGGCATT CGTTACGCTC
AGGGATGAGA AAGATGTGCT AGAGGAGGTA AAGAAAGCCG TAAAGGGAGA AGGTAGGCTT
TCCGGGTTAC TAATAGCGGT AAAGGACAAT ATCTCAACTA GGGGGATAAG AACCACCTGC
TCATCGAAGA TGCTTGAGAA TTACGTCCCC CCATACGACG CCACCGTAAT CTCGAAGCTG
AAGAGGGAGG GAGCTGTGAT ACTAGGTAAA ACCAACATGG ATGAGTTCGC CATGGGCTCA
ACTACAGAGA CAAGTTATTT TGGCCCAACT AGAAATCCTT GGGATTTGTC CAGGACACCT
GGAGGGTCCT CCGGAGGAAG TGGGAGCGCA TTAGCTTCAG GTTATGTGGA TGTTGCCCTA
GGATCTGATA CCGGTGGTTC CATAAGAACC CCAGCCTCTT TCACTTCTAC GTATGGATTA
AAGCCTTCTT ACGGCACAGT GAGCAGGTAT GGGCTAGTGG CATATGCCAA CAGCCTGGAG
CAGATAGGTC CCATGGCGAG GAATTCGACT GATTTGGCGT TACTCTTCTC GATCATAGCT
GGGAGTGACC AGAGAGATGC TACAACCATA GACTACTCTT CCCCCTCCTC TATTAACCCC
ATAACAGTCA AGGGGATAAA GGTTGGGGTG CTTAAGGACG TGATGGAGGC CTCGGATCCA
GGTGTTGTTG GAGTGGTGAA GGATTTCCTT AATAAGATGT CATCTGAGGG GGCAGTAATC
GAGGAAACCA ATCTAGGAAT GGTGAATTAC GTACTTCCCA CCTACTATAT CATTGCTATG
TCAGAGGCTA GCTCTAACCT AGCTAGATAT GACGGTGTTA GATATGGTTA CTCGTCTAAT
GCTGAGGGAA ATTGGAGGGA TGTGTATAGC AGGAACAGGG GTGAGGGATT TGGAAAAGAG
GTCAAGCGAA GAATATTGCT GGGATCCTTT ATTCTGAGCG CTGGATATTA CGAACAATTT
TACATTAGGG CATTGAAAAC TAGGAGGTTA ATAAGAGATT CGCTGGAGAA ATTGTTCAGT
AGATATGACA TACTAGTTTC ACCAACCTCC CCGATACTCC CACCAAAGAT TGGAGAGGTA
ATAGATGACC CGGTGAAAAT GTATGCCATT GATGTGGCTA CCGTGACGGC TAACCTAGCT
GCCATACCTG CACTATCAAT ACCCGCTGGA TTCCATAACG GGTTGCCGGT GGGTGTCCAG
CTCATGGGGA GATATCTCTC CGACACCTTC CTGATGGGGG TCTCACTTTA CATGGAAAAT
GTAACCAAAT TGAAAGATCT AACTGCACCT ATCTAG
 
Protein sequence
MIMEIVNDLR NGNLSPDEYV GRTFDRIRRV EEKVRAFVTL RDEKDVLEEV KKAVKGEGRL 
SGLLIAVKDN ISTRGIRTTC SSKMLENYVP PYDATVISKL KREGAVILGK TNMDEFAMGS
TTETSYFGPT RNPWDLSRTP GGSSGGSGSA LASGYVDVAL GSDTGGSIRT PASFTSTYGL
KPSYGTVSRY GLVAYANSLE QIGPMARNST DLALLFSIIA GSDQRDATTI DYSSPSSINP
ITVKGIKVGV LKDVMEASDP GVVGVVKDFL NKMSSEGAVI EETNLGMVNY VLPTYYIIAM
SEASSNLARY DGVRYGYSSN AEGNWRDVYS RNRGEGFGKE VKRRILLGSF ILSAGYYEQF
YIRALKTRRL IRDSLEKLFS RYDILVSPTS PILPPKIGEV IDDPVKMYAI DVATVTANLA
AIPALSIPAG FHNGLPVGVQ LMGRYLSDTF LMGVSLYMEN VTKLKDLTAP I