Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1739 |
Symbol | gatA |
ID | 5105102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1674683 |
End bp | 1676098 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640507634 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_001191818 |
Protein GI | 146304502 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAATGG AGATAGTAAA TGACCTGAGG AATGGAAATC TATCCCCAGA CGAGTACGTG GGTAGAACCT TTGATAGGAT TAGAAGGGTA GAGGAGAAGG TTAGGGCATT CGTTACGCTC AGGGATGAGA AAGATGTGCT AGAGGAGGTA AAGAAAGCCG TAAAGGGAGA AGGTAGGCTT TCCGGGTTAC TAATAGCGGT AAAGGACAAT ATCTCAACTA GGGGGATAAG AACCACCTGC TCATCGAAGA TGCTTGAGAA TTACGTCCCC CCATACGACG CCACCGTAAT CTCGAAGCTG AAGAGGGAGG GAGCTGTGAT ACTAGGTAAA ACCAACATGG ATGAGTTCGC CATGGGCTCA ACTACAGAGA CAAGTTATTT TGGCCCAACT AGAAATCCTT GGGATTTGTC CAGGACACCT GGAGGGTCCT CCGGAGGAAG TGGGAGCGCA TTAGCTTCAG GTTATGTGGA TGTTGCCCTA GGATCTGATA CCGGTGGTTC CATAAGAACC CCAGCCTCTT TCACTTCTAC GTATGGATTA AAGCCTTCTT ACGGCACAGT GAGCAGGTAT GGGCTAGTGG CATATGCCAA CAGCCTGGAG CAGATAGGTC CCATGGCGAG GAATTCGACT GATTTGGCGT TACTCTTCTC GATCATAGCT GGGAGTGACC AGAGAGATGC TACAACCATA GACTACTCTT CCCCCTCCTC TATTAACCCC ATAACAGTCA AGGGGATAAA GGTTGGGGTG CTTAAGGACG TGATGGAGGC CTCGGATCCA GGTGTTGTTG GAGTGGTGAA GGATTTCCTT AATAAGATGT CATCTGAGGG GGCAGTAATC GAGGAAACCA ATCTAGGAAT GGTGAATTAC GTACTTCCCA CCTACTATAT CATTGCTATG TCAGAGGCTA GCTCTAACCT AGCTAGATAT GACGGTGTTA GATATGGTTA CTCGTCTAAT GCTGAGGGAA ATTGGAGGGA TGTGTATAGC AGGAACAGGG GTGAGGGATT TGGAAAAGAG GTCAAGCGAA GAATATTGCT GGGATCCTTT ATTCTGAGCG CTGGATATTA CGAACAATTT TACATTAGGG CATTGAAAAC TAGGAGGTTA ATAAGAGATT CGCTGGAGAA ATTGTTCAGT AGATATGACA TACTAGTTTC ACCAACCTCC CCGATACTCC CACCAAAGAT TGGAGAGGTA ATAGATGACC CGGTGAAAAT GTATGCCATT GATGTGGCTA CCGTGACGGC TAACCTAGCT GCCATACCTG CACTATCAAT ACCCGCTGGA TTCCATAACG GGTTGCCGGT GGGTGTCCAG CTCATGGGGA GATATCTCTC CGACACCTTC CTGATGGGGG TCTCACTTTA CATGGAAAAT GTAACCAAAT TGAAAGATCT AACTGCACCT ATCTAG
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Protein sequence | MIMEIVNDLR NGNLSPDEYV GRTFDRIRRV EEKVRAFVTL RDEKDVLEEV KKAVKGEGRL SGLLIAVKDN ISTRGIRTTC SSKMLENYVP PYDATVISKL KREGAVILGK TNMDEFAMGS TTETSYFGPT RNPWDLSRTP GGSSGGSGSA LASGYVDVAL GSDTGGSIRT PASFTSTYGL KPSYGTVSRY GLVAYANSLE QIGPMARNST DLALLFSIIA GSDQRDATTI DYSSPSSINP ITVKGIKVGV LKDVMEASDP GVVGVVKDFL NKMSSEGAVI EETNLGMVNY VLPTYYIIAM SEASSNLARY DGVRYGYSSN AEGNWRDVYS RNRGEGFGKE VKRRILLGSF ILSAGYYEQF YIRALKTRRL IRDSLEKLFS RYDILVSPTS PILPPKIGEV IDDPVKMYAI DVATVTANLA AIPALSIPAG FHNGLPVGVQ LMGRYLSDTF LMGVSLYMEN VTKLKDLTAP I
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