| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1671 |
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| Symbol | |
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| ID | 5105317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1612461 |
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| End bp | 1613273 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507565 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191750 |
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| Protein GI | 146304434 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5491] Conserved protein implicated in secretion |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000972701 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.698741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAA GCTCACTTTT CAACATTACA AGAAAGAAGG ATGAACAGGG ATTGTTAGCT
TCTAAAATAA CTGAAATTTC TATTAAATTG AAAGATCAAC AGGACAAGCT TGATGAGACC
ATGAGGAAGC TGGAGGAAAG GGACAGAGAT CTTTTCGATA AGGTGGTGCG ATCACAAGAG
AATGGAGAGA TGACCAGGGC CACAATCTAC GCCCAGGAAA TCTCCGAGAT AAGAAAAATC
ATGAAAATAG TTTACACTGC CAGACTGGCC ATAGAGAAGG TCAGGATTAG ATTGGAAACC
ATCCATGATA TCCAAGGGGT ATCTTTGGTT ATTGGACCTG TGGGAAGGAC TTTGGAGAGT
CTAAAGGAGC AGGTAAGGGG AGTGGCTCCA GAAGTGGCCA TATCTTTGGA CTCAATTATT
AGTAGCGTAA ACAGCATTGC GGTGGAAACA GGAACTGCGG TGAGCGATAG AACTCTAGTC
CCCACAGTGG ACGATGAGGC AAGGAGAATC CTTGATGAGG CAAGGAAGAC TGCAGAGACT
AAGATCAGCG AAAAAATGCC CAAACTAGAT TTGCCTCATC CACCAAGGGA TGTTTCTGCG
CCCAGCGCAA TAGGGCTTCC CTATCCTCCC TCATCTGAAC CCAAGATAGT CAAAAGAAAG
ATAGGAGAGC AGGAACTGCT GGACCTTATC AGGAACAGTG GAGGTATACT GGACGTGTCC
CTAGTGGCAG CCGAGTACGG CGTAGATAAG GAGGAGGTAC TCGGAATACT GAACAATTTG
GCCAGAAAGG GTCTGATTGC ACTGGAGGCG TAG
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| Protein sequence | MKLSSLFNIT RKKDEQGLLA SKITEISIKL KDQQDKLDET MRKLEERDRD LFDKVVRSQE
NGEMTRATIY AQEISEIRKI MKIVYTARLA IEKVRIRLET IHDIQGVSLV IGPVGRTLES
LKEQVRGVAP EVAISLDSII SSVNSIAVET GTAVSDRTLV PTVDDEARRI LDEARKTAET
KISEKMPKLD LPHPPRDVSA PSAIGLPYPP SSEPKIVKRK IGEQELLDLI RNSGGILDVS
LVAAEYGVDK EEVLGILNNL ARKGLIALEA
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