| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1650 |
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| Symbol | glyA |
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| ID | 5104855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1591453 |
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| End bp | 1592748 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507541 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001191729 |
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| Protein GI | 146304413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.278355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGTTC AAAAGGAACT CGAAAAAGTG ATTGAGCTCA CCAGAAGTCA GAACAGGTGG
AGAAGGACTG AGACCATCAA TCTGATTGCC TCCGAGAACG TTATGAGTCC CTTGGCTGAA
GCCCTCTACA TGAGCGATTT CATGTCAAGA TACGCTGAGG GAAAACCCTT CAAGAGGTTC
TATCAGGGAA CGAAGTACGT GGATGAGGTC GAGACTCTGG CCATGGACTA CATGAACCAG
GTCACGGGGA GCAAGTTCTG CGACCTAAGA CCCACAAGTG GTACGTTGGC CAACGCCGCA
GTGTTCAGGG TTCTGGCCAA TCCTGGAGAC AAGGCTTTAA TCGCACCGGT TCAGGCTGGG
GCTCACGTTA GTCACACAAA GTTTGGAACC CTTGGGGCCC TTGGAATAGA GCACATAGAG
ATGCCATACG ATGAGGAAAA CATGAACGTT GACGTGGATA GGGCAGTGAA AATGATAGAG
CAGATTAAGC CCAAGTTCGT TGTTCTGGGA GGTAGCCTTT ACCTTTTCCC GCATCCCACT
AAGGACCTCG CGCCTCACGT TCACTCGGTG GGGGCAAAGC TGGTGTATGA TGCAGCCCAC
GTTTATGGGC TCATGACTGG TAAGGTCTGG AGTAATCCTC TTGATGAGGG AGCTGACTTC
CTTAATGTTT CTACCCACAA AACTTTTCCA GGACCTCAAG GCGGAGCCAT ATTCTCGAAC
GAGGAGGAGG AGTTCAAGAA GGTGTCTAGG ACAATCTTCC CCTGGTTCGT GAGTAACCAC
CATCTACATA GGTTACCCTC CACGGCTGTA ACTGCGCTCG AGATGAAGGT TTACGGGGAG
GATTACGCTA AGCAGATAAC CAGGAACTCG AAAGCCTTGG CGGAGGCCCT AGCCTCTTTC
GGCTTCAAGG TGATAGGAGA ACACCTGGGA TACACCAAGA GTCACCAGGT TGCTGTCGAC
GTGAAGAACC TTGGAGGAGG AGCCTACGTT GCGAAGACTC TCGAGAGTGC TAACATCATA
GTGAACAAGA ACCTCTTACC TCACGATCCA CCGGAGGCAG TTAATGATCC AAGCGGAATA
AGAATTGGGG TTCAGGAAAT GACGAGATTC GGGATGAAGG AGGGTGAGAT GGAAGAGATA
GCAGAATTGA TGAAGCAGAT CCTCGTGGAT AAGAGGGACA TTAACGAGAT GAGAAGGAAG
GTAACCGAGA TGAGATCCAG ATTCCTTGAG GTTAAGTACG CGCTAACGTA TGATCTGTCC
AAGTATAACT CAAAGCTGAT CCCGATGATA CTCTAG
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| Protein sequence | MDVQKELEKV IELTRSQNRW RRTETINLIA SENVMSPLAE ALYMSDFMSR YAEGKPFKRF
YQGTKYVDEV ETLAMDYMNQ VTGSKFCDLR PTSGTLANAA VFRVLANPGD KALIAPVQAG
AHVSHTKFGT LGALGIEHIE MPYDEENMNV DVDRAVKMIE QIKPKFVVLG GSLYLFPHPT
KDLAPHVHSV GAKLVYDAAH VYGLMTGKVW SNPLDEGADF LNVSTHKTFP GPQGGAIFSN
EEEEFKKVSR TIFPWFVSNH HLHRLPSTAV TALEMKVYGE DYAKQITRNS KALAEALASF
GFKVIGEHLG YTKSHQVAVD VKNLGGGAYV AKTLESANII VNKNLLPHDP PEAVNDPSGI
RIGVQEMTRF GMKEGEMEEI AELMKQILVD KRDINEMRRK VTEMRSRFLE VKYALTYDLS
KYNSKLIPMI L
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