| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1628 |
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| Symbol | |
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| ID | 5104833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1572065 |
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| End bp | 1572736 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640507518 |
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| Product | translation initiation factor IF-6 |
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| Protein accession | YP_001191707 |
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| Protein GI | 146304391 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1976] Translation initiation factor 6 (eIF-6) |
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| TIGRFAM ID | [TIGR00323] translation initiation factor eIF-6, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000860601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCTAC AAAGATTTAG CATATTCGGT AGCGACAACA TCGGAGTTTA CATTTTTACA
AACGATAAGT ACACCATTAT CCCGACCAAT CTAGATAAAC AAAGCAAGAG CATAATACAG
GAGAACCTTA ATACAGAGCT TATCGAGACC ACCGTCGCTG ACAGTTTCCT GACGGGGATA
TTTGTAGCTG GAAATAATGA AACAATTCTC CTTCCTAGGA TCGTAAGAGA CGTTGAAATT
AACGCAATTA AGAGCGTTGC TAAGGACGTA AACATTGAAG TAGTTGACGT TAGAGCCACT
GCCCTAGGTA ATGTTATCTT GGCTAATGAT AATGCGGCCC TGGTCTATCC TGAATTTTCC
GATGCTGAGA TGAACATCAT TGGTAAGGCC TTGAACGTTA AGGAGATAAG GAAAGGAACT
ATTGCTCAAG TTTTGGTTGT TGGGTCAGCG GGAGTTGTCA CATCAAAGGG AGGTCTCCTT
CATGTTGAGG CGACAGAGGA GGAGGTTAAG TCGTTAAGTT CATTTTTCAA GGTTAACCTA
GACGTGGGGA CTGTGAACTT TGGAAGCGCT TTCATCAGAA GCGGAATGGT GGCAAATAGC
CATGGAATAC TCGTTGGCTC CTCAACTACC GGGCCAGAGA TTTTAAGAAT ACAAAGAGCC
TTTAGTGATT GA
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| Protein sequence | MNLQRFSIFG SDNIGVYIFT NDKYTIIPTN LDKQSKSIIQ ENLNTELIET TVADSFLTGI
FVAGNNETIL LPRIVRDVEI NAIKSVAKDV NIEVVDVRAT ALGNVILAND NAALVYPEFS
DAEMNIIGKA LNVKEIRKGT IAQVLVVGSA GVVTSKGGLL HVEATEEEVK SLSSFFKVNL
DVGTVNFGSA FIRSGMVANS HGILVGSSTT GPEILRIQRA FSD
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