| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1600 |
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| Symbol | |
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| ID | 5103964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1546726 |
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| End bp | 1547991 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507490 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001191679 |
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| Protein GI | 146304363 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0760665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATA GTATAAAGAT ACTTGGCGGA GGCAATGAAG TAGGCAGAGC TGGGATAGAA
ATATCCAATT CTAGCGAGAG CCTAATTCTT GACTACGGAG TAAATTTTAA TCAAAAGGAT
GAACCAAACT TCCCCCTTCA GGAGTCACCT TCCAAGGTTA AGGGATTCGT GGTCTCACAT
GCCCACTTGG ACCACGTTGG GGCCTTACCC ATTTACCAGA TATCCAGTAG TAAACCGGTT
TACGGAACTG GGATCTCGAA GTACATTACT GAGTTGATGT TGAAGGATTT CATCAAACTG
TCTGGACCAA AGGTCCCCTT TGAGTGGGTT GAAGTGAAGA AGACTATGGA TAACTTTAGG
ACGTTCAATT ACGGTGAGGA AGTGGAGATA GGAGGGTTCA CCGTAACAAC TTCAAGCGCG
GGACACATAC CCGGTAGCGC CATCACAGTT GTGAAAACGG AAAAGGGAGA CATAGCCTAT
ACTGGAGACA TAAACGTGAC CATGGCAAAA CTTGTGAAAC CAGCTGAACT GGAAGTAATG
AGAAAGTCTA GGGTTATCAT CACCGAGGCC ACGTACGGCA AGTTTAACCA TCCCACCAGG
AAAAGCGTTG AGGAGGAGTT TTACGCCTCC GTAATGGAAG TACTTGAGGG CGGAGGGACG
GTCCTTGTCC CAGCGTTCAG CCTTTCCAGA AGCCAGGAAA TACTTTCAAT TCTTGCTGAG
AAGAACATAC CCTACCCCGT GTATTATGAC GGGCTTGCTA GAACAATAAT GGAGATCATG
ATTGATAACA GTCAATACAT AAATAACAAG GAGGCCTTGA GGAAGGCCTA TGATGAGTTC
CAATACGTGA AGGGGTGGGA GGATAGGAGA AAGGCATGGA GATCAAATGG AGTTATAGTT
GCTAGCGCAG GAATGCTAAA GGGCGGACCA GCTGTATACT ATTTCAAGAA GATAGCTGAC
AGTCAAAAGA ACGCGGTGTT CCTCGTGAGC TATCAGGCTG AGAATACTCC CGGAAGGAAG
CTATTGGAGC TAGGTAAATT TGATGACTCC TCACCCTTGT TAAAGGCAAG GCTACAGATG
TTCGACTTCT CCAGTCATGC AGGGAAAAAT CAGCTACTGG ACATAGTTAA GACCTCAGAA
GCCCTTGAGA AGATAGTTGT AGTACATGCG TCTCCAGATA GTGCCCAGGC TTTCTCGGAC
TACGTGAAAG AGAAGTTGGG GGTAGAAGTT TTAGTACCAG AAAATGGACA AGAAATCCGA
CTATGA
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| Protein sequence | MDYSIKILGG GNEVGRAGIE ISNSSESLIL DYGVNFNQKD EPNFPLQESP SKVKGFVVSH
AHLDHVGALP IYQISSSKPV YGTGISKYIT ELMLKDFIKL SGPKVPFEWV EVKKTMDNFR
TFNYGEEVEI GGFTVTTSSA GHIPGSAITV VKTEKGDIAY TGDINVTMAK LVKPAELEVM
RKSRVIITEA TYGKFNHPTR KSVEEEFYAS VMEVLEGGGT VLVPAFSLSR SQEILSILAE
KNIPYPVYYD GLARTIMEIM IDNSQYINNK EALRKAYDEF QYVKGWEDRR KAWRSNGVIV
ASAGMLKGGP AVYYFKKIAD SQKNAVFLVS YQAENTPGRK LLELGKFDDS SPLLKARLQM
FDFSSHAGKN QLLDIVKTSE ALEKIVVVHA SPDSAQAFSD YVKEKLGVEV LVPENGQEIR
L
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