| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1584 |
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| Symbol | |
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| ID | 5104029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1531867 |
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| End bp | 1532817 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507470 |
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| Product | glycosyltransferase family 28 protein |
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| Protein accession | YP_001191663 |
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| Protein GI | 146304347 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0306453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00652045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGAGGC TGCTCATTAT AGCGAGCGGA GGGGGACATA CAGGATTTGC CAAGGCCATC
GCAGAGTATT TACCCTTTAA GGTTGACTTC GTGATTCCTG AGGGCGACGA AAACTCCAGG
AAGCTCTTGA GCCCTCACGC TGAGAAGATA TACGAGGTTA GTAAGCCTAG GGATCCGAAG
GGCCCAAACA CTTCCTTGGT AACAAGGGGG TTTAGGGCGC TCTCGCAATC AATTTCTCTT
CCAAGTTATG ACGTGGTCAT TGCTACTGGC TCGAATCATT CAGTGATACC TTCTTTATTT
CAAAGATTGA GGGGTTCCAC TCTCTTCACG CTAGAAAGCC AGGATAGGAT TGTGACCAAG
GGAAAGGCAG TGTCCGTGTT ATCGCACTTC TCCAAGGGAG TGTTCCTTCA CTGGAAGGAG
CAATCTAGGC TTTATAAGAA CGGGATAGTG GTGGGGCCCA TTCTTCAAAG GAGAAAATAT
GATCCAGTGG ACGAGGGTTT CATCCTAGTC ACCGCGGGGA CCGAAGGTTT CAAAGCCCTT
TTTGACAGGA TTTCCAGTCT AGGGCTAACA AATCTGGTAA TGCAGACTGG AAAGATATCT
CCTGAGCCAT ACGTGAAAAG TGGCGTAAAA GCATTCAGCT TTGATCCAGA TATTGAGAGA
TTTATCGCAG GAGCTTCCCT GGTAATAACT CATCAGGGTA AAACAGCCAT GGAGTCAGCC
GTGCTCTATG GGAAACCCAC AATCATTGTC TTTAACAAGA GCCTCACCAG GGCTGCTACC
CACGAGGATG TGAAACTATA CTCCGAAATA ATAGGTGCAG AATTTCTAGA CGATCCATCC
ACTTGGGAAG ACGAGGAATT GCTTAAGGCC ATTCAGAAGC GTAAAAAGCC CAACTATTAT
GAACCTGGGA CAGAGAGGTT AGTGAAGGTG ATCATGGATT ATCTTGAATG A
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| Protein sequence | MKRLLIIASG GGHTGFAKAI AEYLPFKVDF VIPEGDENSR KLLSPHAEKI YEVSKPRDPK
GPNTSLVTRG FRALSQSISL PSYDVVIATG SNHSVIPSLF QRLRGSTLFT LESQDRIVTK
GKAVSVLSHF SKGVFLHWKE QSRLYKNGIV VGPILQRRKY DPVDEGFILV TAGTEGFKAL
FDRISSLGLT NLVMQTGKIS PEPYVKSGVK AFSFDPDIER FIAGASLVIT HQGKTAMESA
VLYGKPTIIV FNKSLTRAAT HEDVKLYSEI IGAEFLDDPS TWEDEELLKA IQKRKKPNYY
EPGTERLVKV IMDYLE
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