| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1582 |
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| Symbol | |
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| ID | 5104027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1530193 |
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| End bp | 1531206 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507468 |
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| Product | succinyl-CoA synthetase (ADP-forming) beta subunit |
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| Protein accession | YP_001191661 |
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| Protein GI | 146304345 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0310843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00561469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGCTTT ACGAGTATGA GGGAAAGAGG CTTTTTTCGC TCGTTAACAT CCCAGTGCCT
CGCGGACAGG TGGTGAAGTC CCCTGTTCAC GTTCAAGGGA AGGTGGTGGT TAAGTCACAA
CTACTTGAGG GCGGTAGGGG AAAGAGGGGG CTTGTTAGGG TAACTGAGGA CAGTTACGGC
ACGATTCAAG AACTCATGAA GGAAGGTATA AACACATTCT TGATAGAGGA ATTTGTCCCG
CACACCAGGG AAATATACCT TTCAGCTATG ATGGATCGAG AGACTGGGAA CCCGATGATA
GTGGCATCCC CATTTGGTGG GATAAACATT GAGGAGAGTA AGGACGTCAA GACTTTTGTT
ATCCCCATAG ATAGAAAATT AATGAGGTAC GATGTGGATG CAATCGAGAA ATATGTTGGG
TATAGGGGTC TCGGAGGGGT CATAGAAGGT TTACTCAGGC TAATCTTGGA GTACGACGCT
GAATTGGCTG AGATTAATCC GCTCGCCATC ACGGAGAACG GTCCTCTGGC TCTCGACTCC
AAGGTAATCC TAGATGATAA CGCACTGTAT AGACACGAAG AACTGTTAAA GGAGCTACAG
AGGGAGAAAG TTCCAGCGGA TTCCTACGTC GAACTCGAGG GAGACGTGGG CATAGTGGGT
AATGGCGCAG GTCTTACAAT GGCGACCATG GATCTCGTGA AACTAATGGG GGGAAATCCG
GCTGATTTCC TAGATGTAGG AGGGGGTGCA GATACCGAAA AGGTTGCGTC TGCGGTGATC
AGGGTTGGAA GTAACCCCAA GGTGAAAAAG ATAGTGATTA ACATTTTCGG TGGAATAACT
AGGTGTGATG AGGTAGCTAA GGGGATAGTG GAGGCCTATC GTAAGATAAA CAAACCCATT
TACGTCAGGT TAACTGGTAC GAATGAGGAT GAAGGGAAGA AAATACTCCA AAGTCAAGGG
ATAAGAGTTT ACGAAGATGC ATTAACCGCA ATAGGTGATG CCCTACGTTC ATAA
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| Protein sequence | MKLYEYEGKR LFSLVNIPVP RGQVVKSPVH VQGKVVVKSQ LLEGGRGKRG LVRVTEDSYG
TIQELMKEGI NTFLIEEFVP HTREIYLSAM MDRETGNPMI VASPFGGINI EESKDVKTFV
IPIDRKLMRY DVDAIEKYVG YRGLGGVIEG LLRLILEYDA ELAEINPLAI TENGPLALDS
KVILDDNALY RHEELLKELQ REKVPADSYV ELEGDVGIVG NGAGLTMATM DLVKLMGGNP
ADFLDVGGGA DTEKVASAVI RVGSNPKVKK IVINIFGGIT RCDEVAKGIV EAYRKINKPI
YVRLTGTNED EGKKILQSQG IRVYEDALTA IGDALRS
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