| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1580 |
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| Symbol | |
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| ID | 5104025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1529118 |
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| End bp | 1529336 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640507466 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191659 |
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| Protein GI | 146304343 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.13914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00408256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAGACCTT ACTATTATCT TATGAAAGAA AGAGAGGTCG AGGCAAAGAG GCTCGTGGGA
AAGAAACAGG TTAGAGGAAA GGTTTATGAA TACGAGTACT ACACTCTTCC TCTAAACCTA
TATATTCCAA AGTCAATGGT AGAAAAATTC GGAAAAAGAT ACATGCTACA GGTGGACGAG
GACACAGGAA CAATAACAAT AAAACCTAGA ACCAGCTGA
|
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| Protein sequence | MRPYYYLMKE REVEAKRLVG KKQVRGKVYE YEYYTLPLNL YIPKSMVEKF GKRYMLQVDE
DTGTITIKPR TS
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