Gene Msed_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1550 
Symbol 
ID5103995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1508925 
End bp1509326 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content46% 
IMG OID640507436 
ProductDsrE family protein 
Protein accessionYP_001191629 
Protein GI146304313 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0325283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCAAA CCCAAACTGA ACAAACACAG GAGGAACAGA AAAAGAAAAT ACTCATAGTT 
GTGACCCACG GACCGGAGGA TTTGGACAGG ACCTACGCCC CCCTCTTCAT GGCATCAATC
TCTGCCTCAA TGGAATATGA GACATCCGTG TTCTTCATGA TAAAGGGCCC ATTACTACTA
TCAAAGAAAT GGCAGGAAGA CGAGAGAAAG AAGGGAGGAA ACCCGTTCAT ACACTTCTTC
GATATGGCAA AGGACAACAA CGTAAAGATG TATGTGTGCG TCCAAAGCCT TAAGGACATG
TGCCACATGA ACGAAAGCGA CGTTGTGGAT GGAATAGAGC TTGTGGGAGG ATCAACCCTA
ATAGATTTAA CACTGGATGC GGACAGAACA CTATTCTTCT GA
 
Protein sequence
MAQTQTEQTQ EEQKKKILIV VTHGPEDLDR TYAPLFMASI SASMEYETSV FFMIKGPLLL 
SKKWQEDERK KGGNPFIHFF DMAKDNNVKM YVCVQSLKDM CHMNESDVVD GIELVGGSTL
IDLTLDADRT LFF