Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1550 |
Symbol | |
ID | 5103995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1508925 |
End bp | 1509326 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640507436 |
Product | DsrE family protein |
Protein accession | YP_001191629 |
Protein GI | 146304313 |
COG category | [R] General function prediction only |
COG ID | [COG2044] Predicted peroxiredoxins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0325283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCGCAAA CCCAAACTGA ACAAACACAG GAGGAACAGA AAAAGAAAAT ACTCATAGTT GTGACCCACG GACCGGAGGA TTTGGACAGG ACCTACGCCC CCCTCTTCAT GGCATCAATC TCTGCCTCAA TGGAATATGA GACATCCGTG TTCTTCATGA TAAAGGGCCC ATTACTACTA TCAAAGAAAT GGCAGGAAGA CGAGAGAAAG AAGGGAGGAA ACCCGTTCAT ACACTTCTTC GATATGGCAA AGGACAACAA CGTAAAGATG TATGTGTGCG TCCAAAGCCT TAAGGACATG TGCCACATGA ACGAAAGCGA CGTTGTGGAT GGAATAGAGC TTGTGGGAGG ATCAACCCTA ATAGATTTAA CACTGGATGC GGACAGAACA CTATTCTTCT GA
|
Protein sequence | MAQTQTEQTQ EEQKKKILIV VTHGPEDLDR TYAPLFMASI SASMEYETSV FFMIKGPLLL SKKWQEDERK KGGNPFIHFF DMAKDNNVKM YVCVQSLKDM CHMNESDVVD GIELVGGSTL IDLTLDADRT LFF
|
| |