Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1549 |
Symbol | |
ID | 5103994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1508314 |
End bp | 1508730 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640507435 |
Product | hypothetical protein |
Protein accession | YP_001191628 |
Protein GI | 146304312 |
COG category | [S] Function unknown |
COG ID | [COG2210] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0341965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAGGAA AGAAGTTATC CATAATAGTC TTCTCAGGAA CAGTAGACAA GCTGATGCCT GTGGGTATTC TCGCTTCAGG CGCAGCTGCC TCAGGATATG AGGTTAACCT TTTCTTCACC TTCTGGGGCT TAAACGCAAT TAGCAAGAAC GGAATGCAGG CACAACCGCA AGTCGATAAA AACTACGAGC AAATGGGTCC GATGATGATG AAGAGAATGA TGGACATGAA GTTCCCCATG TGGCATCAGA TGGTTAGAGA AGCCAAGGAG GTTGGTGAGG TAAAGGTCTA CGCATGCTCC ACAACCATGG AATTCTTCGG TCTAAAGAAG GAAGATCTAG CTGACTTCGT GGACGACGTG GTTGGCGTTG CAACCTTCCT GGATAGAGCC GAGGGAGGGA CAACCCTATT TATCTAA
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Protein sequence | MAGKKLSIIV FSGTVDKLMP VGILASGAAA SGYEVNLFFT FWGLNAISKN GMQAQPQVDK NYEQMGPMMM KRMMDMKFPM WHQMVREAKE VGEVKVYACS TTMEFFGLKK EDLADFVDDV VGVATFLDRA EGGTTLFI
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