Gene Msed_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1549 
Symbol 
ID5103994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1508314 
End bp1508730 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content48% 
IMG OID640507435 
Producthypothetical protein 
Protein accessionYP_001191628 
Protein GI146304312 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0341965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGGAA AGAAGTTATC CATAATAGTC TTCTCAGGAA CAGTAGACAA GCTGATGCCT 
GTGGGTATTC TCGCTTCAGG CGCAGCTGCC TCAGGATATG AGGTTAACCT TTTCTTCACC
TTCTGGGGCT TAAACGCAAT TAGCAAGAAC GGAATGCAGG CACAACCGCA AGTCGATAAA
AACTACGAGC AAATGGGTCC GATGATGATG AAGAGAATGA TGGACATGAA GTTCCCCATG
TGGCATCAGA TGGTTAGAGA AGCCAAGGAG GTTGGTGAGG TAAAGGTCTA CGCATGCTCC
ACAACCATGG AATTCTTCGG TCTAAAGAAG GAAGATCTAG CTGACTTCGT GGACGACGTG
GTTGGCGTTG CAACCTTCCT GGATAGAGCC GAGGGAGGGA CAACCCTATT TATCTAA
 
Protein sequence
MAGKKLSIIV FSGTVDKLMP VGILASGAAA SGYEVNLFFT FWGLNAISKN GMQAQPQVDK 
NYEQMGPMMM KRMMDMKFPM WHQMVREAKE VGEVKVYACS TTMEFFGLKK EDLADFVDDV
VGVATFLDRA EGGTTLFI