Gene Msed_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1548 
Symbol 
ID5103993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1508053 
End bp1508295 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content47% 
IMG OID640507434 
ProductSirA family protein 
Protein accessionYP_001191627 
Protein GI146304311 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0325283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAG AAACAAAAAT AGCCAAAACC CTAGATGTAA AGGGAATGTA TTGTCCTGGC 
CCTGTAATGG AGACAGCCAA GGCAATAAAG CAAATAAATG TGGGCGAAGT CCTTGAGGTC
CTAGCAACTG ATCCAGCTGC TAAGCCAGAT ATTGAGGCAT GGGCGAGGAG AACAGGACAC
CAGATTCTGG ACATTCAACA ACAGGGCGGT GTAACTAGGA TCCTCGTGAA GAGGGCCAAG
TAA
 
Protein sequence
MSQETKIAKT LDVKGMYCPG PVMETAKAIK QINVGEVLEV LATDPAAKPD IEAWARRTGH 
QILDIQQQGG VTRILVKRAK