| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1513 |
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| Symbol | |
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| ID | 5104042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1476530 |
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| End bp | 1477747 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507401 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001191594 |
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| Protein GI | 146304278 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0963227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.774713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATCAA AAGGCAACAA GGTAACCCTC TCATTCAAGT ACAGGGCATA CCCAACACCA
GAGGTAGAGA GAAAACTCAT CAACACAATG GAAATAGAGG CGAAAGTGTA CAATAAACTA
CTGAACTACA TCGCAGAGAG AAGAAAACAA GGGATTAAGG TAACACAGCT GGACACTCAA
AAGCTACTCA AGGACATGGA CGAAAAACAC GAGGTGTACT CTAAAGCCCT ACAAATGGTC
AACAACGTCC TGTGGTACAA CATCAACGCG TTAGCTAAAC TGAAGAGAAA TGGAAAGAAA
ATCGGAAAAC TTAGACACAA GAAGGCATTC AAGATAGTCT GGTACAACCA ATCTGGGTTC
AAACTACAAG GGGATAAACT CCATCTATCC AAGATAGGGG AGATCAAACT CCTTCTACAT
AGGCCAATAC AAGGAGAAGT GAAAGGGGTC ATCCTGAAGA GAAGCAAGAC AAACAAGTGG
TACGCTATCT TTCAAGTTGA GCAGGAGAAA CAACCCCTAG AGAGGACCGG TAGAGTCGTG
GGGATTGATC TAGGCGTGGA GAAATTTGTT ACAACGAGTG ATGGTGACGT AATTGAGAAC
CCGAAACTCC TAGATAGGAG GGAAGAGAGG ATCAAATTGT TACAGAGGAG ACTATCGAGA
AAAAGAAGGG GTTCAAGGAA TTACGAAAAG GCCAGGGCAA AGCTCGCTAT GGCTTACGAA
AGGCTTGAGA ACACTCTGAA TGATTACATA CACAAGATAA CAACGTGGTT AGTCAAGGAT
CATGACGTAA TAGTTGTTGA GAAACTGAAC ACACGAGAAA TGGTACAGGA CTCCCTCGGC
AGGTTGAGGA AGCACATCCT TTACTCCAGT TTCTCCACCT TCCTCCATCA CCTCTCCTAC
AAGGCTGAAA GAGCTGGTAG GAGGGTGGTC GAGGTGGATC CGGCATATAC ATCGCAGACC
TGTTCCAGGT GTGGGTACAG GGTAAAACTT AGCCTATCTG ATAGGGTGTT TCGATGCCCT
AGCTGTGGCC TTGTAATTGA TCGCGATTAC AACGCGTCCC TAAACATCCT GAAACGCGGG
GTTGGGACTG CCCCTCTGCC TGTGGAGGGG GAACCTCTAC TGTTCACCTT TCATGAGGTG
GTGTACAGCA AGTTCCCTCA GAGAAGCAGG AAATCCTCAC CGCGAGGTGG GGATGCTCCG
TCCGTAAGGG CGGAGTAG
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| Protein sequence | MKSKGNKVTL SFKYRAYPTP EVERKLINTM EIEAKVYNKL LNYIAERRKQ GIKVTQLDTQ
KLLKDMDEKH EVYSKALQMV NNVLWYNINA LAKLKRNGKK IGKLRHKKAF KIVWYNQSGF
KLQGDKLHLS KIGEIKLLLH RPIQGEVKGV ILKRSKTNKW YAIFQVEQEK QPLERTGRVV
GIDLGVEKFV TTSDGDVIEN PKLLDRREER IKLLQRRLSR KRRGSRNYEK ARAKLAMAYE
RLENTLNDYI HKITTWLVKD HDVIVVEKLN TREMVQDSLG RLRKHILYSS FSTFLHHLSY
KAERAGRRVV EVDPAYTSQT CSRCGYRVKL SLSDRVFRCP SCGLVIDRDY NASLNILKRG
VGTAPLPVEG EPLLFTFHEV VYSKFPQRSR KSSPRGGDAP SVRAE
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