Gene Msed_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1475 
Symbol 
ID5104722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1445993 
End bp1446655 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content48% 
IMG OID640507363 
ProductDSBA oxidoreductase 
Protein accessionYP_001191556 
Protein GI146304240 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAA CGTTCTTCCA TGACGTGTTG TGCCCCTTCT GCTACGTCAC CAACAAGAGG 
TTAAAGAAAG TCCTCTCTGA GTACAAGGAC GTGCATGTGA AGCATAAGGC GTTCATGATA
ATATCCTCCC TTGACGATCT TCTGGCTGCG GCACCAACTC CTGAGGATGC GAGGGAACTG
TTCAAGAACG AGTTCTCGAT TCTAACTAGG TACTTCCCCG ATTATGATCC TAAGAAGGTA
ATCGAGAAAG GCAAGATAGG CCACATCTGG TCAATGCCAC CACTTATGGC CTGCAAGGCG
GCTGAATTCC AACGGGGAGA TGAGGGTCAC TGGGAATATT TCACTTTAGC TCAAGAAAAG
TTCTTTATGG AAGGGGAGAA TGTCAACGAC GACGAGGTCC TGCTCTCCAT AGCTGAGCAG
ATAGGCCTTG ACATGGACAG GTTCAAGAAG GATTTCAAGT CAAAGGAGGC TAAGCTCGCC
GTGATACAGG ATGAGGAAGA AGCTAAGGCC ATGGGGATTA AGGGAGTCCC TGCCCTTCTG
ATCAACGAGA AGTGGCTCAT TAGGGGCGTT CAAACAGAGG AATATCTCAA GCAGGTAATA
GATGATGTAT TACACTACGG AGAACCCAAA AAGATAGAAC TGAAGGCCTA CTGGGAGCAG
TGA
 
Protein sequence
MQITFFHDVL CPFCYVTNKR LKKVLSEYKD VHVKHKAFMI ISSLDDLLAA APTPEDAREL 
FKNEFSILTR YFPDYDPKKV IEKGKIGHIW SMPPLMACKA AEFQRGDEGH WEYFTLAQEK
FFMEGENVND DEVLLSIAEQ IGLDMDRFKK DFKSKEAKLA VIQDEEEAKA MGIKGVPALL
INEKWLIRGV QTEEYLKQVI DDVLHYGEPK KIELKAYWEQ