Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1448 |
Symbol | |
ID | 5104818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1415655 |
End bp | 1416128 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640507336 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_001191529 |
Protein GI | 146304213 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTCG TTGGAGTAAT AATGGGAAGC AAGAGCGACT GGGAAGTCAT GAAGGAGGCC GTGGATATCC TGAAAAACTT CGGGGTTAGT TATGAGGTCA AGGTTGTTTC TGCCCATAGA ACACCTGAGT TCATGATGAA ATACGCTAAG GAGGCTCATG AGAGGGGTAT AGAGGTTATT ATTGCGGGGG CTGGAGGGGC TGCCCATCTC CCTGGTATGG TGGCCTCACT AACCCATCTC CCCGTTATAG GAGTACCGGT TCCATCGAGG AACCTTAACG GTCTTGATTC CCTTCTTTCG ATTGTGCAAA TGCCCTACGG CGTCCCCGTT GCGACTGTGG CCATCGGAGG GGCAAAGAAC GCTGGCCTAC TGGCGGTTAG GATACTATCC GTGAAGTACC CTGAGCTGGG AGAGAAGATG AGAAAGTTCA TGGAGGAGAT GAGGAATGAC GTACTCTCCA CGGAACTCGT TTAA
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Protein sequence | MPLVGVIMGS KSDWEVMKEA VDILKNFGVS YEVKVVSAHR TPEFMMKYAK EAHERGIEVI IAGAGGAAHL PGMVASLTHL PVIGVPVPSR NLNGLDSLLS IVQMPYGVPV ATVAIGGAKN AGLLAVRILS VKYPELGEKM RKFMEEMRND VLSTELV
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