Gene Msed_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1448 
Symbol 
ID5104818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1415655 
End bp1416128 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content51% 
IMG OID640507336 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001191529 
Protein GI146304213 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTCG TTGGAGTAAT AATGGGAAGC AAGAGCGACT GGGAAGTCAT GAAGGAGGCC 
GTGGATATCC TGAAAAACTT CGGGGTTAGT TATGAGGTCA AGGTTGTTTC TGCCCATAGA
ACACCTGAGT TCATGATGAA ATACGCTAAG GAGGCTCATG AGAGGGGTAT AGAGGTTATT
ATTGCGGGGG CTGGAGGGGC TGCCCATCTC CCTGGTATGG TGGCCTCACT AACCCATCTC
CCCGTTATAG GAGTACCGGT TCCATCGAGG AACCTTAACG GTCTTGATTC CCTTCTTTCG
ATTGTGCAAA TGCCCTACGG CGTCCCCGTT GCGACTGTGG CCATCGGAGG GGCAAAGAAC
GCTGGCCTAC TGGCGGTTAG GATACTATCC GTGAAGTACC CTGAGCTGGG AGAGAAGATG
AGAAAGTTCA TGGAGGAGAT GAGGAATGAC GTACTCTCCA CGGAACTCGT TTAA
 
Protein sequence
MPLVGVIMGS KSDWEVMKEA VDILKNFGVS YEVKVVSAHR TPEFMMKYAK EAHERGIEVI 
IAGAGGAAHL PGMVASLTHL PVIGVPVPSR NLNGLDSLLS IVQMPYGVPV ATVAIGGAKN
AGLLAVRILS VKYPELGEKM RKFMEEMRND VLSTELV