Gene Msed_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1432 
Symbol 
ID5104802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1402747 
End bp1403688 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content45% 
IMG OID640507320 
Productformate hydrogenlyase subunit 4-like protein 
Protein accessionYP_001191513 
Protein GI146304197 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACA CGTTAGTGGA AACACTTATC CAGGTCTCTG CAGTACTTGC CCTCTCTCCT 
CTCTATCCCG GCATCCTTGA GAAAATGAAA GCTAGGGTGG AAGGAAGAAG AGGTCCTAGC
ATATTTCAGC CCTACTACGA TCTACTAAAA CTTAACAAGA AGGAGATGAC CATTCCGAGA
AACGCAGGAT GGCTCTTCGT CAATGGACCA TACCTTGTTT TCTCGATTTA TGTCCTTATC
TCCTTTGTAA TTCCTGTTGT TTACCCAGAA CCTGTCTATC TTACCCCAGT GGTGGACTTT
TTAGGAGGAG CTCTCCTTTT CTCGCTTTCA GGTTTCTTGA AAGTCTATGA GTCCATGGAA
AGCTCTAGTA ACCTAGTAAC TCTTGGGGTA TCGAGAAACA TTTCCTTTGC CTATCTTGGA
GAGGCCACCC TGCTAACAGT GTTCATAGCA GTTGCGTTGG TAACTGGAAC TAATAATCCC
TACATTACAA TGGAGGCTAT TCAATCGCCG ACAGAATATC TCTTCCTGCC TCATATAACA
GCCAGTGTGG CCTTTTTCAT GTTATGGTTG TACGAGACTG GGAAACTTCC GTTGGAGAGC
TCAGGGATGT CGGAAATGGG AATGATCGAT GATTCTCTAG TATATGAATA CAGCGGAAAG
GGTCTGATGC TATTGAGATG GGGAAGCTAC GTGAAGTCTT ACCTTCTTGG GTCTGTGTTG
TTAAACGTCT TCCTCATACC CTGGGGAATG CAGACGGGTG TACTTGGGGC CATGGCGGAT
GTGGGAATAA TGTTCCTGAA GTGGTTAGTT CTCCTTATGA TAACCGTGGT AATAGAGACA
AGCCTCGCGA AGTTCAGGCT ATTTAAGATA CAGGACTTCC TGATTGTGGC CTTAGTGCTC
TCGGTGTTTT CGGTTATCCT GACGGTGACC TTGAATGGTT GA
 
Protein sequence
MINTLVETLI QVSAVLALSP LYPGILEKMK ARVEGRRGPS IFQPYYDLLK LNKKEMTIPR 
NAGWLFVNGP YLVFSIYVLI SFVIPVVYPE PVYLTPVVDF LGGALLFSLS GFLKVYESME
SSSNLVTLGV SRNISFAYLG EATLLTVFIA VALVTGTNNP YITMEAIQSP TEYLFLPHIT
ASVAFFMLWL YETGKLPLES SGMSEMGMID DSLVYEYSGK GLMLLRWGSY VKSYLLGSVL
LNVFLIPWGM QTGVLGAMAD VGIMFLKWLV LLMITVVIET SLAKFRLFKI QDFLIVALVL
SVFSVILTVT LNG