| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1428 |
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| Symbol | |
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| ID | 5104159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1398035 |
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| End bp | 1399330 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640507316 |
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| Product | hydrogenase 4 subunit F |
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| Protein accession | YP_001191509 |
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| Protein GI | 146304193 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.289915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.541686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGCC TAAACCTAGT GGGATGGATA ATACTAGTTC CCATTTTGGG AAGTGCAGTA
GTTTTTAAGG AAAAGTACTC CACGGTAGCC TCTGCTACGA TCACCCTAAT TCTCGTGCTA
GCTCTCAAAC CATTTTTACC CATAGTCTCC CAATTTTACG TTAGTAACTT AACTTGGTAT
TTTTTGGTCA TGGTGGCCGG TGTCTATCTG CTCTCATCCA TTTACTCCCT CTTCTACGTG
GAGAAGAGGG GAGTTCAGGA AAGGAATTAC TATTATTTCC TCAATCTATT CGCCGCCTCC
ATGTTGTTCA CACTCTCCGT CAACAATCTT GGACTCATGT GGGTTGGATT AGAGGCCACT
ACGATATCGT CCGTGCTTCT AGTAACCTTT GAGGGTACTT CAACTGCACT TGAGGCAGGA
TGGAGGTATC TCCTTCTTGT TTCCTCCGGA GTGACTTTCG CATTCATCTC TGTCATCCTT
TTCTATTTCG GCCTACACAC CTTAACCATA AGCGAGGTAC TATATCCTCA CTTTTCTCCA
TTATTCTCGT TGGCCTCAGC CATTGCACTA TTGGGTTTCG GGACAAAGGC TGGAGTATTC
CCAGTAAATA CCTGGCTACC AGATGCTCAT TCGGAAGCTC CTTCACCTGT GAGTGCACTT
TTTTCAGGAG TCCTCCTGCC AGTATCTATC TACATTCTTC ACACAATTTT CATCATAGCA
CCCCTTCCGG GACTGTATAG CTGGCTAGCT ACTATCTCCA TTCTCATTTC CTCCATAATG
ATGGCTAGCC AACGATATTA CAAGAGGCTA TTCGCCTACT CCACGATCGA GAACATGAAT
TTTGCCCTTC TTGGGGTTGC AGTGAACTCG TTAACAGGTT TAGTTATACT CTTGGTGACT
CACGCATTCG CTAAGGCTGG GGCGTTTTAT GCGTCTGGAT CCCTGCTCAA AAGCCAAGGG
ACCAAGGAGA TCAACGAACA TGGACTCTAT GGAAGTCCCT TACTAGCTTC TTCGCTCATC
CTTTCATCTC TAGCAGTAAC GGGTGCACCT CCCTTTGGCA ACTTCATTGG AGAGTTCCTG
ATTCTCTCCT CAGTCCTCAA ACATGGACTT GTCCCCCAAT TCTGGATTGT AATCATTTCC
TTGATAATAT CATTCGTCTG CGTTAACTAT CATGTGTCTA GGATGATCTT TAAGGGAAAA
CCATTTCGGG AGAGATACAA GGCACTCTCG ATCATTGCCA TAATTTCAGC TCTGATTTCC
TTAATCGTTG GTGTAGTAGG GGTGGTACTA CTATGA
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| Protein sequence | MTGLNLVGWI ILVPILGSAV VFKEKYSTVA SATITLILVL ALKPFLPIVS QFYVSNLTWY
FLVMVAGVYL LSSIYSLFYV EKRGVQERNY YYFLNLFAAS MLFTLSVNNL GLMWVGLEAT
TISSVLLVTF EGTSTALEAG WRYLLLVSSG VTFAFISVIL FYFGLHTLTI SEVLYPHFSP
LFSLASAIAL LGFGTKAGVF PVNTWLPDAH SEAPSPVSAL FSGVLLPVSI YILHTIFIIA
PLPGLYSWLA TISILISSIM MASQRYYKRL FAYSTIENMN FALLGVAVNS LTGLVILLVT
HAFAKAGAFY ASGSLLKSQG TKEINEHGLY GSPLLASSLI LSSLAVTGAP PFGNFIGEFL
ILSSVLKHGL VPQFWIVIIS LIISFVCVNY HVSRMIFKGK PFRERYKALS IIAIISALIS
LIVGVVGVVL L
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