| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1413 |
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| Symbol | |
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| ID | 5104623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1380335 |
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| End bp | 1380844 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507302 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191495 |
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| Protein GI | 146304179 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000104505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000761829 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTAACCG AGAGTAGGGA GCTTGTTAAA TCTCTCATGG AAGCAAAGGA AAGTATTATC
TCAGGAGATG TGAAGCGAGG AGTTGAAATA ATCGAAAAGA CTGTGAACTC CTCCAATATC
AAAGAGGCAA ATTGGGTAAT CTGTAACGTA ATTGATGCAG CGGACTGTGC ATACGTGGTG
GAGACGCTAA ACGCCATAGG TAAGATATTT GATGTGACCG CCTGTGGCAA TCTGAAGAGA
GTGATCTCCT GTTTCATGAG GGCTGGTAAG GACTCTGAGT TCGTTGACTT GGCCCTTTCG
GCCCTAGTGC AGAAAAGAAG GGAGGATCAG CTGGACAAGA TCTTGGCAGA GACTGGCGAG
ATTCCTGCTC CTCTCCTTCT CAAGTTGGCC TCTGCATACG GGAAGATCGG GAATAGGAAA
AAGGAACAGG AACTGTTGAA ACAGGCATGC GAAAAGGGAC TTAAGGAGGC TTGCAGAGAT
ATTAACCAGA TTTTCCCAAG AATAACATGA
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| Protein sequence | MVTESRELVK SLMEAKESII SGDVKRGVEI IEKTVNSSNI KEANWVICNV IDAADCAYVV
ETLNAIGKIF DVTACGNLKR VISCFMRAGK DSEFVDLALS ALVQKRREDQ LDKILAETGE
IPAPLLLKLA SAYGKIGNRK KEQELLKQAC EKGLKEACRD INQIFPRIT
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