| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1323 |
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| Symbol | |
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| ID | 5104574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1301478 |
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| End bp | 1302632 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507212 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001191405 |
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| Protein GI | 146304089 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00637621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCT TAATACTTGG AGCAGGGTAT GCAGGACTTA CCGTGGCTCA TAAGTTGAGG
AGGTACCTCA ATGACGAGAT AACCGTTATC TCTGAGTCTA GGGTGGTGAG AGAAAACACA
ATTTTCCCGC TTCTCCTCAC GGACGAGGTG AAGGTCGAGG AAACTGAATT TGACGCCAAG
GTAGCCATGG AGAGGAAGGG AGTGAACTTC GTGGAGGGTA GGGTGACGCA GATCCTGCCT
GAGAGCAGGG AGGCCAAGAC GGACAAGGGA ACCTTTGACT ATGACTATCT CTTCCTAGCC
CTCGGTGGAG GATATGAGGA GAACTTCAGG AGGATACCTG GACATGAGAA CGCAGTCATG
CATCACACCC TGGATGGATT CCTCAAGCTT AAGGAAATGC TGTGGAACAC TGAGGGGAAC
GTGTTCGTAG GTAACGCGCC AGGGAGTCCC ATAGAGGGTC CCTCGTATCA GGTCGCCCTC
ATAGCTGAGT ACATTCTTAG GAGGAGAGGG GTGAAGGGGA AGGTTTACCT GGCTACGCAA
AGTCCCAAGG GTGTCTTTGG CCCAATTCCC TTGGACTGGG TTCACGAGAA GGCCAACTCA
TACTTCGAGA GGAGGGGTAT AAGCGTCCTC AAGGGTAAAG CCGTAAAGGA GATTAAGAGA
GGGAAAGTAG TCTTGAGCGA CGGCCAAGAA GTGGAGGCTG ATGTGATCTC CGTGCTTCCC
TCACTCTCTG CGCCAAAGGT GGTTAGAGAT GCTGGACTTG CGGGAAATTC AGGTTTCGTT
GAGGTGAAGT TACCAAGTTT TAGGAAGGAT GACAGGATAT TTGCCCTAGG AGACCTGGCC
CAGACTCCCT TCCCTAGGAC AGCTAGGGCA GCAATGATCT CCGCAGAGAA TGCAGTCTCG
TCAGTGTTAA GGGAGGTCAA GGGACTGGAG TTGCCCATGT ACTCCCTAGG TGTTCTATGC
GTGATGGAGG GAGGAGATGA CGGTGGAATT CTTAGATTCG ATACGAATGG GAAAGAGGTG
AAAACCACGC TAGCCTTTGG AAAGAGTTAC GTCACCATCA AGAAACTCTA CAGTAAACTT
CTAGTCAAGA GGGCCTTTGA TGTTCCCTAT CACGGAGCGC TAACAGTTGA AATACGCTAC
AACTTCTCTC CTTAA
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| Protein sequence | MKFLILGAGY AGLTVAHKLR RYLNDEITVI SESRVVRENT IFPLLLTDEV KVEETEFDAK
VAMERKGVNF VEGRVTQILP ESREAKTDKG TFDYDYLFLA LGGGYEENFR RIPGHENAVM
HHTLDGFLKL KEMLWNTEGN VFVGNAPGSP IEGPSYQVAL IAEYILRRRG VKGKVYLATQ
SPKGVFGPIP LDWVHEKANS YFERRGISVL KGKAVKEIKR GKVVLSDGQE VEADVISVLP
SLSAPKVVRD AGLAGNSGFV EVKLPSFRKD DRIFALGDLA QTPFPRTARA AMISAENAVS
SVLREVKGLE LPMYSLGVLC VMEGGDDGGI LRFDTNGKEV KTTLAFGKSY VTIKKLYSKL
LVKRAFDVPY HGALTVEIRY NFSP
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