| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1255 |
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| Symbol | |
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| ID | 5104668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1232124 |
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| End bp | 1233005 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640507146 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001191339 |
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| Protein GI | 146304023 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.463201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTCG TGGTCACGGG AGCCGGTGGC CTCCTCGGTA AGAGGATAGT TCAGGCGTTC
AAGGACTACG AGGTTGTGGG GGTATACCAC AGGAGCCAAC CGGAGACCTC CCCTTTTCTC
GTCCTAGATC TCAGCTCCCT AAACTTGAGG CCCATTGAGG AGCTATCGCC GGACGTCATC
ATCCACGCCG CAGCTCTCAC AGACGTGGAT AAGTGTGAAA GGGAACCAGA TCTCGCCAGA
CTCCTCAATG TCGACGTAAC TAGGGAGATC GTAAAGGTTA GCAAGAGGAC CAACGCTTTC
CTGGTTTACA TTTCAACCGA TTACGTCTTT GATGGAACCA GGGGGAATTA TCGGGAGGAG
GACGAGACCA ACCCCGTAAA CGTTTATGGC CTAACGAAAC TTGAGGGCGA AAAGCTCGTG
AGGGATGTGG ATAGCCTAGT GGTTAGGACG AGCACGCCCT ACGGGAGTAA CCCTGCTAGT
GGAAAGGACA ACTTCGCGCT TTGGTTGCTC AAGAAGCTGA AGGCTGGGGA GAGGGTTAAC
GCCCTCGTGG ATCAGGTTAC TTCTCCGACC CTCAACACGA ACTTTTCCCT TATGTTGAGG
GAGGCCGTGG ACAGGAGGAT TAAGGGTGTG TTGCACCTCG CTGGCCGATC CCAGGTTAGC
AGATATGAAT TCTCCCTGGC ACTCGCGAGG ACCTTTGGGC TAAATGAGAC CCTGATTAAC
CCAGCTCACT TCAACGAGAT GAAGTGGTTC GCTAGGAGGC CCATGAATTC CTCCCTCAAC
GTAAGTAAGG CAATGTCGCT TGAACATAAA CCCATGAGCC TTCAGGAGGC CTTGAGTGAG
TTAAGGAGGG AAATTGAGGC CAACGATATA GTCTGGAAGT GA
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| Protein sequence | MRVVVTGAGG LLGKRIVQAF KDYEVVGVYH RSQPETSPFL VLDLSSLNLR PIEELSPDVI
IHAAALTDVD KCEREPDLAR LLNVDVTREI VKVSKRTNAF LVYISTDYVF DGTRGNYREE
DETNPVNVYG LTKLEGEKLV RDVDSLVVRT STPYGSNPAS GKDNFALWLL KKLKAGERVN
ALVDQVTSPT LNTNFSLMLR EAVDRRIKGV LHLAGRSQVS RYEFSLALAR TFGLNETLIN
PAHFNEMKWF ARRPMNSSLN VSKAMSLEHK PMSLQEALSE LRREIEANDI VWK
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