Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1235 |
Symbol | |
ID | 5103849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1214340 |
End bp | 1215419 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640507127 |
Product | SMC domain-containing protein |
Protein accession | YP_001191320 |
Protein GI | 146304004 |
COG category | [R] General function prediction only |
COG ID | [COG1106] Predicted ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTACTT CCATCAAGAT CAAGAACTTC AAGAGCTTCA GGGACGTCAC ACTTAATCTC GGAAAAATAA GTGTAGTGGG CCCAAATGGT AGTGGAAAGA CTAACCTAGT TGATGCGTTC TCCCTTCTAA AACAGGTTTT GAGACCCTCC TCGCTTTCAC CCTACCCTTT CGCGAGATGG GGCGAATACA AGAACGTAGT GTTCATGCAA GATCCTGGTT TGGATATCTC CTTTGAGCTA GAGGGAAAAC ACAAGGGAAT GGAGTACAGA TATTTCCTTG AGATCAACGG CGAGCACTCC TTCACCGTGA AAAGGGAGGA GGTCAGGCTA GGGGACAGGG AAATAGAGAG GGAGAGAGAC GCGGTCAAGA TTGGGGACAA AAGAATAGAG ATCCCCGTGA ACTACAGTGT TTTCAATTTA TTTAACGCAC CTGATCCTGG CTCACCTGAT TTGCTCTCCC TTTCTCTGGA GGGCGAATTG AAGGACTTCA TGCTAAACTT CTTCAACGAC GTCCTTATTC TTCGTTCCAC GGAGAGAGCC CTACAACCTG CTCACGTCTC GGCTCCTGAG GGGATTGGGG AGGACGGGGC CGGTCTCCCC AGGGCTCTGT TGGGGAAAAA TCTGCCAGGT CAGGTGAGTA ACTTCTTGGA CTCCCTAAAC ATGAGCCTAA GGGTAACTGT CTCAGACGAC GGTAATGTTA CGATCTCCGC TGTGGGGGTC GTGAATGGGA GAGAAATAGT CATTCCCCCA ACCTCGATCC CCTCGGGAGT GGTCGAGATG ATAACCCTTC TGACCTCAAT CGACGTGCTT AAGCCCAGCC TGGTAGTTAT AGACGGGTTG GAAAATTCCC TGCACCTGAA GTTCATGGAG AAGTTAATTG ACGTTCTTAG ATACTCTGAG CCCCAGTTCC TGATCACAAC GCACTCGCCC CTGGTCATCG ACTTCCTGGA TCCCTCAGAG CTCGTGATCC TTGATAGGGA GACTGGAGAG ACTAGGGTAA CCACGATTCA AGACCCTGAG GGATTGAAGA AAAAGCTCCT GGAGGAGGGT CTGACCCTAG GCGAATGGAT CATATACTAG
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Protein sequence | MITSIKIKNF KSFRDVTLNL GKISVVGPNG SGKTNLVDAF SLLKQVLRPS SLSPYPFARW GEYKNVVFMQ DPGLDISFEL EGKHKGMEYR YFLEINGEHS FTVKREEVRL GDREIERERD AVKIGDKRIE IPVNYSVFNL FNAPDPGSPD LLSLSLEGEL KDFMLNFFND VLILRSTERA LQPAHVSAPE GIGEDGAGLP RALLGKNLPG QVSNFLDSLN MSLRVTVSDD GNVTISAVGV VNGREIVIPP TSIPSGVVEM ITLLTSIDVL KPSLVVIDGL ENSLHLKFME KLIDVLRYSE PQFLITTHSP LVIDFLDPSE LVILDRETGE TRVTTIQDPE GLKKKLLEEG LTLGEWIIY
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