Gene Msed_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1201 
Symbol 
ID5104497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1173850 
End bp1174938 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content50% 
IMG OID640507093 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit 
Protein accessionYP_001191286 
Protein GI146303970 
COG category[C] Energy production and conversion 
COG ID[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID[TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.337765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAAG ATGTAAAGTA TGTGGAGATA ACGTATAGGG GGATATTTCA GAAGAGGCTG 
GCCAAGTATA TTGCAGAGGG GTTAGTGTAC ATGTCGAGAT CCATGGGGAA GTCTGCCGTC
TCCTTCGGAA GGTATGGAGA CTCTCCTGAG AGGAACGGAG TACCAGCAAA ATACTACGTG
GCCCTGGGAA GCGTGAGCGA GGAAGATCTC ATAGGTTATT CCACTAGAGT TGAACCAGAG
TACGTGGACG TTATAGCTGT TCTAGATGAT ACCCTTCTCA AGGGAGTTGA GTCTTGGGCA
TGGCAGGGCG TTCAACCAAT CAATCTTAAG CTCAGGGAGG GTGGGGCCAT GATAGTTACC
TCAAGGAAGC CCATGGAAGA GGTCGTGAAG CTGACTCCTT CAAAGGAATT TAACTGGACT
CTAGGGAAAC TGAACTGGGA CAGATCATTC TCAGGGTTGT GGGCCTTCAA CGACGACACC
ACAATGGAAA GGGTTTGGGG AGCCATAGCC AGGGTGAGGC CTGACATAGT GGATATCCAG
CACGTGGTGG AGTATGTTAA GTCGCATAAG AAGGATAAGT TAAACGAGAG GTTGAAGGCT
GTGGAGGAGG CGTATGAGGG GCTAGTCACA AAGACCATGA ATCCTGGAGA AGGTGTGGAA
TTCAAGTACA ATCCTCCTAG ACTCCTAACC TGGCAAGAGA TGATGGAGGG GACAGCAATC
CCCGCTGTTC CACGCGGAGG TAGAAACGAG CAGTTCAAGA GGGGAACGAC GAAAACGGAG
AGACCCACGG TGGATTTTGA TGCCTGCATA AAGTGCGACC TATGCTGGGT CTATTGTCCT
GACGGCTGTT TCGACAAGAC GCCAGAGGGT TATTACGACA TAGCCTATGA CTACTGCGTG
GGATGCGGGA TTTGCGCAGA GGTATGCCCA GTGAAGAACT GCATAGTCAT GGTCGATGAG
AAAAGACTAC CGGACTACAC AAGGCCTTAC TCCATGTGGA AGGCCAACAA GGCTGAGTAC
AAGAAATGGC TCCAGAACGC GAGGCAAGAG GTAAGGGAAA GACCAATTGT ACCGGGGTTG
GGAAGATGA
 
Protein sequence
MGEDVKYVEI TYRGIFQKRL AKYIAEGLVY MSRSMGKSAV SFGRYGDSPE RNGVPAKYYV 
ALGSVSEEDL IGYSTRVEPE YVDVIAVLDD TLLKGVESWA WQGVQPINLK LREGGAMIVT
SRKPMEEVVK LTPSKEFNWT LGKLNWDRSF SGLWAFNDDT TMERVWGAIA RVRPDIVDIQ
HVVEYVKSHK KDKLNERLKA VEEAYEGLVT KTMNPGEGVE FKYNPPRLLT WQEMMEGTAI
PAVPRGGRNE QFKRGTTKTE RPTVDFDACI KCDLCWVYCP DGCFDKTPEG YYDIAYDYCV
GCGICAEVCP VKNCIVMVDE KRLPDYTRPY SMWKANKAEY KKWLQNARQE VRERPIVPGL
GR