| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1199 |
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| Symbol | |
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| ID | 5104495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1171585 |
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| End bp | 1172598 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507091 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001191284 |
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| Protein GI | 146303968 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.276982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG AGTTAGAAAA AGAGGAAAGG ATGTATAAGT CAATAATCAA GACAATAAAG
CAGGCTCCTC TGGAGGAGTT TTACGCCTCC GGCCATAGGA CCTGCCAAGG TTGCGAGTCA
GCCCTACTCA TGAGGTATCT CGCCAAGATA TCTGGAGAGA GAACCATAGT CGTTGGAGCG
ACGGGGTGCA TGTATGTCGC AAACACCACA TACTACACGA CGTCATGGGT AGTCCCGTGG
GTTCACACTC AGCTCGGAGG ATCGGGTGGA GCTGCCCTGG GGACAGCAGC GGCGCTGAGG
GCTCTCATGA GAAAGGGAAA GATAAAGGAG GAACCCATAA ACGTAATAGT GTTCTGCGGA
GATCTGGGTT GCGCAGACAT GGGTCTCTCA GGCGTATCAA ACGCCATGAC CTATGACTAT
AATCTCCTAA TAATATTATA TGATAATGAG TCATCCGCCA ACACCGACAT CCAGGAAACG
AGCATGACTC CCTACGGGGC ACAAACTTCC TTCAGTAGAC CAGGTACCGC CAGGAGAATC
ATGAAGAGAA GGTGGAAGAA GAGCGTAGTC CCCATGATAA TAGCTGGGCA CAGAAACGTG
AGATATGCCG CGACCACTAG TCCCGCATAT CCTCTGGACA CCTTAAACAA GATAAAGAAG
GCGCTCAGTG CAGGCGGTCC AACGTTCATT CACTCTCTAG ATCCATGTCC GAAGGGATGG
GACTACGACC CCATGTACTC ACACGAGCTT GGGACCCTTG CTGTGGAGAC CGGTATATGG
CCTCTCTATG AGTATATTGA CGGTAAGATA ATCTATAACG AACCAACCAA GGGTATTGTG
GAGGGGAGGA TCAAGAGGAA ACCCGTCAGG GAGTACCTGG AGAAGCAAGG AAGGTTCTCC
CACTTCGTGG AGGAGGACTT CGAGCATTTC CAGAAAATGG TAGATGAGAT GTATGAGAGC
TGGGAGATAC CTGGAGTGAT GCCCATCAAA TCTGTGGAAT TAGCAAGGAA ATAA
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| Protein sequence | MSEELEKEER MYKSIIKTIK QAPLEEFYAS GHRTCQGCES ALLMRYLAKI SGERTIVVGA
TGCMYVANTT YYTTSWVVPW VHTQLGGSGG AALGTAAALR ALMRKGKIKE EPINVIVFCG
DLGCADMGLS GVSNAMTYDY NLLIILYDNE SSANTDIQET SMTPYGAQTS FSRPGTARRI
MKRRWKKSVV PMIIAGHRNV RYAATTSPAY PLDTLNKIKK ALSAGGPTFI HSLDPCPKGW
DYDPMYSHEL GTLAVETGIW PLYEYIDGKI IYNEPTKGIV EGRIKRKPVR EYLEKQGRFS
HFVEEDFEHF QKMVDEMYES WEIPGVMPIK SVELARK
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