| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1115 |
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| Symbol | |
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| ID | 5103588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1042391 |
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| End bp | 1042966 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507009 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit |
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| Protein accession | YP_001191202 |
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| Protein GI | 146303886 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
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| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.499339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAT TGGAAACTCC ACTCAAGGAG GACGTTGTCC AATCTTTACG TCTTGGAGAA
GAGGTATACC TCTCAGGGAA AATTTACATC ATGAGAGACG CTACCCTCAG GAGAATCTTC
GAGCAGGGAG TTGCTCCACC TGTAAACTTG AAAGACCAGG TTGTATTCTT TGGGGCACCA
AGCTTCACAA AGGACTCCAA CGGGTACACA ATCCTCTCAG TTGGGGTAAC CACTTCCCAG
CGCATGGAAA AGTATATTCC TCGCCTCCTC AATGAGCTTG GGGTGAAGGG TATTGTAGGG
AAGGGAGAGC TGAGCGAGAG GATGAACCCA GAGTTTTCAA GGGCCAAGTC GGTGTACCTC
CTTTTCGTGG GAGGCGCCGC TGCACTAGCT ACCTCATCCA TACAGAGGGT TAACAAGGTT
TGGTGGGAGG ACCTCAGGGG AGAGGCACTC TTCGAGGTTG AGGTAAACTC CTTAGGACCT
GCCTTTGTGG CCATAGACGC TCAGGGAGGT AACCTTCTTA TGGAGAATAG GGAGAAAGTG
CTGAGGAACT TGAACGCCCT TCTAAAGGAG GAGTGA
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| Protein sequence | MSKLETPLKE DVVQSLRLGE EVYLSGKIYI MRDATLRRIF EQGVAPPVNL KDQVVFFGAP
SFTKDSNGYT ILSVGVTTSQ RMEKYIPRLL NELGVKGIVG KGELSERMNP EFSRAKSVYL
LFVGGAAALA TSSIQRVNKV WWEDLRGEAL FEVEVNSLGP AFVAIDAQGG NLLMENREKV
LRNLNALLKE E
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