| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1039 |
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| Symbol | |
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| ID | 5104426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 963713 |
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| End bp | 964888 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506935 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001191128 |
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| Protein GI | 146303812 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.354978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA GAATTGTAAT AGTTGGTGGC GGAATAGGAG GAATGGGAGT AGCCACAACT
CTCGCAGGTA AGTTAAATGC AGAGATAACC GTGATCAATA AGGATAACTT CTACGTGACA
GGGCCCTCGA GACCATTGCT CCTTACAGGC GAGCAAGAGT ACGGAAGAAT GCTGAGGGGA
TACGAAAAGG TGGGAGAGAA GGGTATTAAG GTGGTCGCGG GGAACGTGAT AAGGGTTGAT
CCCGACAATA GGAAGATAAC CCTGTCTGAA TCAGGGTTTG GACTGACAAG CAGGGAAATC
CAGTACGACT ATCTAGTGCT TGCCCCTGGC GTCGTATATG ACGGCTCCTC GATCACAGGG
CTTGATAGGA ACTGGTGGAG GAACACCACG GTCTACGACC CTGGAAGGGT AAACGTGTTG
AGGCAAAGGC TATGGAGCGA GAACGAGGGG ACAGTCCTGA TTTATGCCCC AAAGGCTCCC
TACAGATGTG CCCCTGCTCC GACGGAGACG GCCCTCCTGG CTCACACAGT GCTAAAGCAC
AGGGGAGTGA GGGAGAAGTT CAGGATAATA CATGTGGACG CAAACGATAA GACACAACCG
CCTTTCATCG CCGACGTTGT GAAGCAGGTC TACGAAAAGG CCGGGATAGA GCTTGTGACT
AACCAGGAGA TAGTTGAGGT GAATGAGAAA GAGGTGATCA CGAAGTCTGG CGAGAGATAT
GGATATACCA TACTTGCCCT CCTGGAGCCC AACAGGGCTC CCAGGTTCGT GGAGGAGGCT
GGACTAGGAA CGCCGTTCGT CGAGGTTAGG TCACCGCAGG ACTTGAGACA TCCGAAGTAT
GATGACGTCC TGGCAGTGGG AGATGCAGCG AAGTTACCCT TCCCTAAGAA CCAGGAGATC
GCCTTCGAGA GCGCCCTCTT CGCCTCCAAC AAGATTCTGG AGATGGAGGG TGTAACGGAG
AAAGTTCCCG TTCAGTATGC GTTTGTGGGC TGGGCCTATA TGGGTAATCT CGAGGGAAGA
CTTGAGACCC AGAGCCTCCA GTTCCAACTA GACTTAACAA CCCAACCGCC AAAGCCTGCG
AAGGATCCTC AGCTCAAGAG AGAATATACA CTACAGAAGG ACAGATGGGA GCAGGCATAC
CTTGAGAGGC TCTTCGGATA TTCCCCTAAA TCGTGA
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| Protein sequence | MAKRIVIVGG GIGGMGVATT LAGKLNAEIT VINKDNFYVT GPSRPLLLTG EQEYGRMLRG
YEKVGEKGIK VVAGNVIRVD PDNRKITLSE SGFGLTSREI QYDYLVLAPG VVYDGSSITG
LDRNWWRNTT VYDPGRVNVL RQRLWSENEG TVLIYAPKAP YRCAPAPTET ALLAHTVLKH
RGVREKFRII HVDANDKTQP PFIADVVKQV YEKAGIELVT NQEIVEVNEK EVITKSGERY
GYTILALLEP NRAPRFVEEA GLGTPFVEVR SPQDLRHPKY DDVLAVGDAA KLPFPKNQEI
AFESALFASN KILEMEGVTE KVPVQYAFVG WAYMGNLEGR LETQSLQFQL DLTTQPPKPA
KDPQLKREYT LQKDRWEQAY LERLFGYSPK S
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