Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1014 |
Symbol | |
ID | 5105613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 934653 |
End bp | 935186 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640506913 |
Product | hypothetical protein |
Protein accession | YP_001191106 |
Protein GI | 146303790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0038833 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATCATA TGGATAGGAA GTTCCTGTTT CAAGGTAACG TGATAAGCTT GATCGCATCC CTAGTGATAC TTTACGGGCT AGTTCTCCTT GAGTTGAACG GGATAGGGTA CGCCCTCTCC CCCACGTTTC TGGGGATAAT GACCGTGGTC TGGGCAGTGG CCATCCCCTC CTTTTTAAGT TATCATAGGA GTAAACTTCA GAAGCAATGG ATAATGGACT ATTTCGCAGT TTCAGCGATC GTAATAACCC TTGTTGGGTT AATACTCGCG TTCCTCCACA GTTTCCTGGG GATTGAGGTA ATAGTAGCTG GTTACACTCT GGAGCCAATA GCTGGAATCT CCATTTACCT AACTGCAAAT CAGATATCCA GGTTGTACTC GTCGCTTTTC TTCTGGGGTG CCGTGATCTT CACCGCAGGG CTTCCCCTGT ACCTCTTCCA CGCTGGTGTA GTCTCCATTG TGGGGGACAT TGTGAAAATG GTTGGGATAA TAATGTTGCT GACGAAGGGC AAGGTTACTA CACCCTCAAG GTAA
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Protein sequence | MNHMDRKFLF QGNVISLIAS LVILYGLVLL ELNGIGYALS PTFLGIMTVV WAVAIPSFLS YHRSKLQKQW IMDYFAVSAI VITLVGLILA FLHSFLGIEV IVAGYTLEPI AGISIYLTAN QISRLYSSLF FWGAVIFTAG LPLYLFHAGV VSIVGDIVKM VGIIMLLTKG KVTTPSR
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