Gene Msed_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1014 
Symbol 
ID5105613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp934653 
End bp935186 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content47% 
IMG OID640506913 
Producthypothetical protein 
Protein accessionYP_001191106 
Protein GI146303790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0038833 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATCATA TGGATAGGAA GTTCCTGTTT CAAGGTAACG TGATAAGCTT GATCGCATCC 
CTAGTGATAC TTTACGGGCT AGTTCTCCTT GAGTTGAACG GGATAGGGTA CGCCCTCTCC
CCCACGTTTC TGGGGATAAT GACCGTGGTC TGGGCAGTGG CCATCCCCTC CTTTTTAAGT
TATCATAGGA GTAAACTTCA GAAGCAATGG ATAATGGACT ATTTCGCAGT TTCAGCGATC
GTAATAACCC TTGTTGGGTT AATACTCGCG TTCCTCCACA GTTTCCTGGG GATTGAGGTA
ATAGTAGCTG GTTACACTCT GGAGCCAATA GCTGGAATCT CCATTTACCT AACTGCAAAT
CAGATATCCA GGTTGTACTC GTCGCTTTTC TTCTGGGGTG CCGTGATCTT CACCGCAGGG
CTTCCCCTGT ACCTCTTCCA CGCTGGTGTA GTCTCCATTG TGGGGGACAT TGTGAAAATG
GTTGGGATAA TAATGTTGCT GACGAAGGGC AAGGTTACTA CACCCTCAAG GTAA
 
Protein sequence
MNHMDRKFLF QGNVISLIAS LVILYGLVLL ELNGIGYALS PTFLGIMTVV WAVAIPSFLS 
YHRSKLQKQW IMDYFAVSAI VITLVGLILA FLHSFLGIEV IVAGYTLEPI AGISIYLTAN
QISRLYSSLF FWGAVIFTAG LPLYLFHAGV VSIVGDIVKM VGIIMLLTKG KVTTPSR