Gene Msed_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1005 
Symbol 
ID5105604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp925668 
End bp926018 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content46% 
IMG OID640506904 
ProductArsR family transcriptional regulator 
Protein accessionYP_001191097 
Protein GI146303781 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0103223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0233709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATA GACCGCTAAT ACTTGAACTT GAATCCTTCT TTTCAGCGCT ATCTGATGGA 
ACGAGACTGG AGATAACCCT ATACCTGAGG GATCACGAGG CAACTGTGCA GGAAATAGCT
AACGCGCTTG GGAAGTCCCA ATCGTTAATA TCTCATCATC TCTCATGTCT CAGGAACTGC
GGAGTTGTGA ACGTTGAGAA GAGGGGGAAA TACTCGGTCT ATTCCCTTAA CGGCGAGGCC
GTGAGGAAGA TAATAGATGA AGCAATAGGT CATGTTAGTA GGCATAGTAA ATCGATTCTT
TCCTGCGAGA TAGTGAGGGA GGAAAAGGGA GAACTCACTC AGACCCGTTG A
 
Protein sequence
MDNRPLILEL ESFFSALSDG TRLEITLYLR DHEATVQEIA NALGKSQSLI SHHLSCLRNC 
GVVNVEKRGK YSVYSLNGEA VRKIIDEAIG HVSRHSKSIL SCEIVREEKG ELTQTR