| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0982 |
|---|
| Symbol | |
|---|
| ID | 5104532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 907050 |
|---|
| End bp | 907520 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640506882 |
|---|
| Product | phosphohistidine phosphatase, SixA |
|---|
| Protein accession | YP_001191075 |
|---|
| Protein GI | 146303759 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2062] Phosphohistidine phosphatase SixA |
|---|
| TIGRFAM ID | [TIGR00249] phosphohistidine phosphatase SixA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.123547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCA TACTAATTGT AAGACACGGA GAGAGCGAAC CTCAAACTGA AGGTATAAAT
GATCAGGATA GAAAGCTAGT TAAGAAGGGA GTTAAACAGA TGAGGAGAGT GGCCAACTTC
CTAGAGGAAA TGGGATACGA ACCCGATCAG GTCATGGTCA GTCCCATGCT AAGGGCAGTT
CAGTCAGCGG AAGTTATACT TGACGAGATG GGTCTTGAGA TTAAGGCTGA AACCCTTGAG
GATCTCCTTC CCGACAAGGA TCCCTCGAGC CTAGCAGAGA AACTCAAGGA ATTGCAGGGA
ACGATCCTTA TCGTGGGTCA CGAACCTCAT CTCTCTAAGC TAGTGAAGGC CCTCACTTCG
GCGGAAGTCG AGATAAAGAG GGGCGGACTC GCGGTAGTGG AAGTGGACGC GACCGAGAAA
ACGTCTAAAT TGGAGTTACT TCTAACCCAG AAGGTCATGA AGCTGATCTA A
|
|---|
| Protein sequence | MTTILIVRHG ESEPQTEGIN DQDRKLVKKG VKQMRRVANF LEEMGYEPDQ VMVSPMLRAV
QSAEVILDEM GLEIKAETLE DLLPDKDPSS LAEKLKELQG TILIVGHEPH LSKLVKALTS
AEVEIKRGGL AVVEVDATEK TSKLELLLTQ KVMKLI
|
|---|
| |