| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0966 |
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| Symbol | |
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| ID | 5104517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 892771 |
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| End bp | 893526 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506867 |
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| Product | blue (type1) copper domain-containing protein |
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| Protein accession | YP_001191060 |
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| Protein GI | 146303744 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03095] rusticyanin |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000986426 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.363962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAGAG TTCTTGTAAT TTTAATTATT GGAATAATAG CGGTGGTCGG TATAGTCACA
TACACGTACG CTAATATTTA CCTTCCCAAT TACTACTCTC AGCAATCTGT CGCGTACTAT
AACGGACAAC TATCCATGAT GGGGTACGGT CCTCAAGGTT CACAAGGGAT GATGGGAGGA
ATGATGGGTG GATATCGCAT GATGGGATAT CATGAGGGAT ACGCTTACGG ATATCTTGGA
TCTACCTCCA TCCCTCAAGC AGTGCAAGCA ATAAGGAGCG TCCAACCATA TGCCAGAGTA
TTCCCACAAA ACGACACAAT AGTATTCTAC TCAACCCAGA TCAACCTAGT TGTCTTATCC
ATGGGACACC AAAGGGCATT CAATTTAACC AATTATACAG CACCTCTCTC AGCCCATGCT
CAGGACAACG TCTTTGTTAT AGATGGACTA ATCAATCCTA CCTTAATTAT GCCAGGTAGG
TCAGTCCTGA ACATAGAGCT CATAAACCTA GATGCCGGAG ATTTTCATAA CCTAGCCATA
ACTCCAGTAC CTCCTCCATA TCCCTACTAT TCCATGATGT ATATTAGAAT GAATGTGATG
GGAATGACGC CAATGATCCC CTACGCGAAT TACAATGATG GGCAAGCTTA TGAGTCAAGT
TTCAGCGTGT CCCTTCAACC TGGAACCTAT TACTATGTAT GCGAGTATCC TGGTCACGCC
GAAATGGGAA TGTACGGGGA GATCGTGGTG ACGTAA
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| Protein sequence | MKRVLVILII GIIAVVGIVT YTYANIYLPN YYSQQSVAYY NGQLSMMGYG PQGSQGMMGG
MMGGYRMMGY HEGYAYGYLG STSIPQAVQA IRSVQPYARV FPQNDTIVFY STQINLVVLS
MGHQRAFNLT NYTAPLSAHA QDNVFVIDGL INPTLIMPGR SVLNIELINL DAGDFHNLAI
TPVPPPYPYY SMMYIRMNVM GMTPMIPYAN YNDGQAYESS FSVSLQPGTY YYVCEYPGHA
EMGMYGEIVV T
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